Trichosporon asahii var. asahii: A1Q1_04928
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Entry
A1Q1_04928 CDS
T06566
Name
(RefSeq) hypothetical protein
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03030
DNA replication
tasa03410
Base excision repair
tasa03420
Nucleotide excision repair
tasa03430
Mismatch repair
tasa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A1Q1_04928
03410 Base excision repair
A1Q1_04928
03420 Nucleotide excision repair
A1Q1_04928
03430 Mismatch repair
A1Q1_04928
03440 Homologous recombination
A1Q1_04928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tasa03032
]
A1Q1_04928
03400 DNA repair and recombination proteins [BR:
tasa03400
]
A1Q1_04928
Enzymes [BR:
tasa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A1Q1_04928
DNA replication proteins [BR:
tasa03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
A1Q1_04928
DNA repair and recombination proteins [BR:
tasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
A1Q1_04928
MMR (mismatch excision repair)
DNA polymerase delta complex
A1Q1_04928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
POL3_N
DNA_pol_B_2
DNA_pol_B_exo2
REV3_N
divDNApol
Roquin_1_2-like_ROQ
Motif
Other DBs
NCBI-GeneID:
25988440
NCBI-ProteinID:
XP_014177210
UniProt:
J5SMU8
LinkDB
All DBs
Position
Unknown
AA seq
912 aa
AA seq
DB search
MVQVQEPSAKRRKVDGGAGEDSYPSDFQDLLEAENDQGETDDAWPRPPLPKVNPATDTLV
AESSLPQFGPTLRLFGVTKGGNSMLAHVHGFRPYFYVAAPSGFLQSDLTPLKDTLNTGSL
AVADCEIANRKSLWGYRGDDNVPFIKIVCTEPKALPKVKDRSPASGLVQPGDDDVRKQHS
VSSSLHDRHQGTRVLDAAADVQLVGMNWVEVPAGKYSVLRGSEKRSRCQLEFTMHYSDLV
SHAPEGDWLTIAPLRVLSFDIECAGRKGIFPEANIDPVIQIAAMVMRHGEKKPFVRNVFT
LNTCAHIVGAQVKQFMDERQLLLAWRDFVQEVDPDLVIGYNISNFDLPYLLDRAKALKIP
DFSYLGRLEDTHFSSKAFGQRDSKAVNLDGRLQMDILQVIQRDYKLRSYTLNAVCAQFLG
EQKEDVHHSIITELQNGTADSRRRLAVYCLKRLLDRLMCLVNYTELARVTGIPFNDVLTR
GQQIRVISQLYRNAKDKGYLIPAMRSEGTDEQYEGATVIEPSKGYYDTPIATLDFASLYP
SIMMAHNLCYTTLVDKATIQRLGLVENEDYVQTPNNDFFMTEKRRKGLLPHVLENLLGAR
KRAKADLKVEKDPFKRAVLDGRQLALKISANSVYGFTGATIGKLPCLAISTSVTAYGRQM
IDMTKREVEAQYSIQNGYDHDAQVIYGDTDSVMVKFGCPDLPTAMRLGAEAADLVSAKFK
KPIKLEFEKVYFPYLLISKKRYAGLYWTRPDKYDKMDTKGIEQTIADLLQNKIDMSQLVI
TKALAKLERMKKRDAGSAPALGDRVAYVIVKGIKGAAAYEKSEDPLYVLENNVPIDTRYY
LENQLSKPLMRIFEPILGSRANSLLSGEHTRSIQIATPTVGGLMKFAVKTATCLGCRTPL
KGSKGAFPYGRT
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggttcaggtccaagaaccgtctgcgaagaggagaaaagtggatggaggcgcgggtgaa
gacagctacccgagtgacttccaagatcttctagaggccgagaatgatcaaggagagacg
gacgatgcctggccgcgaccgccgctgcccaaggtcaaccctgcaacagacactctggtt
gcagagtcatcgctccctcaatttggaccgacattgagattgtttggtgtaacgaagggt
ggcaactcgatgctggcccatgtccacggatttcgtccttacttctatgttgctgcccct
agtggatttctccaatccgacttgacgcctctcaaagatacactgaacactggcagcctt
gccgttgccgactgtgagatcgcgaatcggaagtcgctctggggatacagaggcgatgac
aacgtcccgtttatcaagattgtgtgcactgagccaaaagcgctccccaaagtcaaagat
aggtctccagcttctggactcgttcaaccaggagacgatgacgtacgaaagcaacattca
gtttcctcttcgcttcatgatcgacaccaaggtacgagagtgttggatgccgccgctgac
gtgcagcttgtcggtatgaactgggtcgaagttccggctggaaagtactcagtactccga
ggatcagagaagcgctcgcgctgccagttggagttcactatgcactactcggatctcgtt
tcgcatgcgcccgaaggtgactggttgacgattgcgccactccgagtcctcagttttgat
attgagtgtgcaggtcgcaagggtattttccccgaagccaacatcgatcctgtcatccaa
atcgctgcgatggtaatgcgacacggagagaagaagccttttgtccgcaacgtgttcact
ctcaatacatgtgcccacattgttggagcgcaagtgaagcagttcatggacgagcgacag
ctcttgttggcgtggcgagactttgtgcaggaggtggaccccgatctcgtgatcggctac
aacatatccaacttcgatctgccgtacctgctcgaccgtgcaaaggcactgaaaatcccc
gacttctcgtaccttggacgtctggaagacacccatttctcttcgaaagcctttggtcag
cgtgactccaaagcagtcaatctggatggtcgcctacaaatggatatcctgcaagtcatt
cagcgcgattacaagcttcgaagttacacgctgaacgctgtttgtgctcagtttctgggg
gaacaaaaggaagatgttcaccactccatcatcaccgagcttcaaaatggcaccgccgat
tcgcgccgtcgtcttgctgtttactgtttgaagcgacttctcgaccgtctcatgtgcctc
gtcaactacaccgaactggcgcgagtcactggtatcccgttcaacgacgtattgacccgt
ggccagcagattcgtgtcatctcgcaactataccggaacgcaaaggacaaaggctatctg
attcccgctatgcgtagtgagggcacggacgagcagtacgaaggtgccaccgtcattgag
ccctctaagggttattacgacacgcctattgcgacactcgatttcgcttcgctatacccg
tccattatgatggcgcacaatctatgctacaccacgctcgtggacaaggcaacaattcag
cgtttgggtctcgtcgaaaacgaggactatgtccagactccaaacaacgacttcttcatg
accgaaaagcgaaggaaagggttgttgccgcatgtcttggagaatctccttggtgcacgt
aaacgagccaaggccgatctcaaggtggagaaagatccgttcaaacgcgctgttctggac
ggacgtcagcttgctctgaagatcagtgccaactctgtgtatggcttcactggtgccacc
attggaaagcttccctgtttggccatctcaacctctgtgaccgcatacggacgccagatg
attgacatgactaagcgcgaggtcgaggcccagtactcaatccaaaacggttacgaccac
gacgctcaagtcatttacggtgacactgattcggtcatggtgaagtttggctgcccggat
ttgccgacagccatgcgcttgggagcggaggccgccgacctcgtttccgccaagttcaaa
aagccaatcaaactggaattcgagaaggtgtactttccttatctgctcatcagcaaaaag
aggtacgcaggtctctactggactagaccggacaagtacgataagatggacacgaagggt
atcgagcaaacgatcgccgatcttctccaaaacaaaattgatatgtctcaactcgtcatc
actaaggcgctggccaagctcgagaggatgaagaaaagagatgccggttccgctcctgcg
ctgggagaccgtgtggcgtatgtgattgtcaaaggtatcaagggtgcggccgcatacgaa
aagtccgaagaccctctctacgtcttggagaacaacgttcctatcgacacccgttactac
ctggagaaccagctgtcgaagccgctgatgcgaatcttcgaacccattctgggctctcga
gctaacagtttgttgtccggtgaacacactcgcagcatccagattgccacgccgaccgtc
ggcggtctcatgaagtttgcggtgaagacagcgacgtgtcttggttgccgaaccccattg
aagggctcgaagggtgcgtttccgtacgggagaacctga
DBGET
integrated database retrieval system