Trichosporon asahii var. asahii: A1Q1_05026
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Entry
A1Q1_05026 CDS
T06566
Name
(RefSeq) essential RNA-binding component of cleavage and polyadenylation factor, Yth1p
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
A1Q1_05026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tasa03021
]
A1Q1_05026
03019 Messenger RNA biogenesis [BR:
tasa03019
]
A1Q1_05026
Transcription machinery [BR:
tasa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
A1Q1_05026
Messenger RNA biogenesis [BR:
tasa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
A1Q1_05026
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCHC
zf-CCCH_4
zf-CCCH_2
zf-CCHC_2
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
25988538
NCBI-ProteinID:
XP_014177308
UniProt:
J6EPM0
LinkDB
All DBs
Position
Unknown
AA seq
324 aa
AA seq
DB search
MTTIPLPTENLGPAADFVRPDFHQVNLNIENYLKQERNFKLDSDEQICRMNLQPEGCIFE
HNCPLRHTQPAPINFKPQPPLPTHPREREKKTTVCKHYLRNLCKVGDNCEYTHDWNLRTM
PTCVWFVKLGKCELGGECLYYHPKDRRVECPDYNRGFCRLGPECPRRHVRRTLCQAYLAG
FCPDGPDCKQAHPSPKLPDPESYVNPPVPDPKQSGPPPQLPAGYGRWREYKYDPNAVVVP
APAWTEGGSLQGWRAGGFLSGHARRGDHRDRDGGGEDGGRRGGWVKDLSTILCFRCNQYG
HFANQCPNDAVPGDRGGLRGGGGR
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgataccattgccgaccgagaaccttggtcccgccgccgactttgtgaggcca
gacttccaccaggtcaacctaaacatcgagaactacctcaagcaggagcgcaacttcaag
ctcgattccgatgagcagatctgtcgaatgaatctgcagccagagggctgcatctttgag
cacaactgtcccctgcgacacacgcagccggccccgatcaacttcaagccgcagccgccg
ctcccgacgcacccgcgtgagcgcgagaagaagacgaccgtgtgcaagcactacctccgt
aacctgtgcaaggtcggcgacaactgcgagtacacacatgactggaacttgcgcacgatg
ccgacgtgtgtctggttcgtcaagctcggcaagtgcgagctcggtggcgagtgcctctac
taccacccgaaagaccggcgcgtcgagtgccccgactacaacagaggtttctgcaggctg
ggccctgagtgcccgcggcggcacgttcggcgaacactgtgccaggcgtatctcgctgga
ttctgtcccgacggaccagactgcaagcaagctcacccttcgcccaagcttcccgatccc
gagtcttatgtcaacccgcccgtgccggacccgaagcagtccggacctccgccccagctt
cccgctggatacggacgatggagagagtacaagtatgacccgaacgccgttgttgtcccc
gcgcccgcctggaccgagggtggaagtctacagggatggcgtgctggtggcttcctgtct
ggccacgcccgacgaggagatcaccgcgaccgcgacggcggcggtgaggatggcggacgc
agaggaggatgggtcaaggacctcagcactatcctttgcttcaggtgtaaccagtacgga
cactttgcgaaccagtgcccgaacgatgccgtccccggagaccgcggcggcctgcgcggc
ggcggcggtcgttaa
DBGET
integrated database retrieval system
