Trichosporon asahii var. asahii: A1Q1_05028
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Entry
A1Q1_05028 CDS
T06566
Name
(RefSeq) nucleoporin
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
A1Q1_05028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasa03019
]
A1Q1_05028
03036 Chromosome and associated proteins [BR:
tasa03036
]
A1Q1_05028
Messenger RNA biogenesis [BR:
tasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
A1Q1_05028
Chromosome and associated proteins [BR:
tasa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
A1Q1_05028
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nucleoporin_FG
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
25988540
NCBI-ProteinID:
XP_014177310
UniProt:
J5SM12
LinkDB
All DBs
Position
Unknown
AA seq
1926 aa
AA seq
DB search
MFGSTWGQNNQQKPGGLFGSGTSGGFGQSSGELLGRLNACADNSGGFGQQQNTGGFGQQQ
QQQNTGGGLFGSTSNQTSGFGSGGFGQQNNQQTSSFGARPTFGATGSSPFGGAATNTGGG
LFGSNNNTSTFGSNTGATSSFGNNNASSGGLFGSKPATGFGSTTSSGGLFGQPQTSTFGS
TQNAAGPSNQVHNYTPGPLPPCPQTGTAAPPYQPTWQRDPSGPLNKDPLPPHLFHVITAM
DAYKGGSFEELRMLDYQQNRKEPTAQPAAATGGFGQTTSTTGGFGSTGSTFGQPAQQNTG
FGAKPAGGLFGSTSGTTSGFGNTSGGFGSTSGGFGQQNNTGSVFGQQQNANTGGFGQAAN
TNTGGGLFGQQQNNTSSGGLFGSANNNTTSGFGQNNQQQGTTTGFGGFGAKPAFGSTSTT
STGFGQTNNATGFGQTNTGSTGFGFGQQNQQQQQQPQQSTGGLFGSTTNNAFGQNNAQQN
NTLGGGTSLFGQNNQQQTNTTGGLFGNTANKPAGGLFGSTPAATTGTTGGFGGFGQNNTT
TTTQPATGGLFGNNAATTTGTTGGGLFGNTTNTTTTQPAATGGLFGNTTNTASTGGGLFG
AKPATTTGGLFGSTTTTQPATTGTGFGGFGQQQNNATTGGGLFGNTAANNQAQAKPAGSL
FGGGGSSLFGAQNNQQTTQPAAGGSLFGGLNQSQPAATGGLFGSTASTTQPAAGQTGGLF
GSTLGQSTAQQPSLTASVDQNPYGKNELFAYSGQKLEVGSTNKKPALPPLTASSYRVTPS
KGRVVKLRGFASPLNASQSSGRASSPSLASPSRSVIGSPAPSDRYNGLTDAALSPNAFIP
RPNVKKITVTPKANAVNSEDPLESVLGKSQLRGSVNGNGTPATPDQGSKSPTLSISNGRA
LTGDDTPTRRSQPIAQESIRAVTAERPLKRGDYWCRPKLEKLRSLSHQELSKLENFTVGR
KGYGEVTFLQPVDLTDLPSLQDLFGKTVIVEDLELTVYPDDSNKPPRGQGLNVPAQISLE
NCFARDKATRQPITDPNDPRYRRQIKRVKAVQGTEFVDFSDDGIWTFTVEHFSRYGLADS
DEESDEGMNDSPSTGKGKQLSPDSTIEGETESEEDDFLPPTKSMHDRDVDMNHDSGLEET
GDSYDEADEEEDDESFVSERRWENPVTNNLDSPGIRRVRLMQSNFFANQEVAAPAVSAAE
AQRTRALEAARALQRGRAEAGFGEAEEDMNELDDRAVKRASFGELASPPPRQPRKYAKVP
LAESSVNGNEGVRPDTGLALGRSFRCSWGPNGELVHFGKICAPKEEYKSPSDATVFVQQV
DLLADSPEIERPKADRLLSLLLDNSQIEQVDGTPMAMTSTEIRFKEFARLFDEGDRSHEA
TIWRLGKALFDEIDLRLPADTPDDVRERVFQVRRKLALSKWLEDAVAPAVDGDLAAAGDN
RPAKLFSLLTGNQTDRAVQSALDGKDMRLATLVSQAGGPEVFRSEVLRQLDDWTKFKANS
VIGYDYRRLYALLAGITDVSKGDSSRGADAAPDVLVAEGLDWKRAFGLYLWHGRPFEETI
GQVFEAYTHALDDAHPPAKPIPPYLEKPDGEREWNMATKPTDVLCNLIRMFVDLTVPLEE
VLSARGCSPSPTDLRLPWHLYLLLTQALEARDFSDREEPNAEGIAFSASANELTRSYAAQ
LEEEGQWTWAAFVLLHLELPEARRNAVRELLFRHPNPNNSERMFLVNTLRIPPAWLHEVK
AAEFATENDPYREYFELIRAGLADRAQRLLITKLAPEAILRDSQSLLRRLCEALEPLHPT
GWEYGGKLFLDYLNIINDTKPLLASVLRAGLHPDPVEDAELNRLCKSVPRVIQLLPALFP
NKDDVQQVASLSEMLSNLQNLGAVLHMNNRIERPPISDLLVDKDRLHLLQGAATESFERS
LSAIMA
NT seq
5781 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggtcgacttggggccagaacaatcaacagaagccgggcggcctctttggcagc
ggtacctctggaggcttcggtcaatctagcggtgagctattggggagactgaacgcgtgc
gctgacaattcaggcggcttcggacagcagcagaacacgggaggtttcggccaacagcag
cagcagcagaacactggtggcggcttgtttgggtcgacctccaaccagacctctgggttt
ggcagcggtggatttggacagcagaacaaccagcagaccagctcgtttggcgctcgtcct
accttcggtgccaccggctcatcgcccttcggtggtgcggctaccaacaccggcggtggc
ctgttcggaagcaacaacaacacatcaactttcggaagcaacactggagctacctcttcc
tttggaaacaataatgcgtccagcggcggtctgtttggcagcaagcctgcgaccggattc
ggttcgacgacgtcctccggtggtctctttggtcagccccagaccagcactttcggctct
actcagaatgctgctggtcccagcaatcaggtgcacaactacacccccggccccctccct
ccatgccctcaaaccggcactgcggctcctccttaccagcccacctggcagcgtgacccg
tcaggaccgctcaacaaggacccattgccgcctcacctgtttcatgtgatcactgcgatg
gacgcctacaagggtggcagcttcgaggagctgcgcatgctcgactaccagcagaaccgc
aaagagccgactgcacagcctgctgcggcaacgggtggtttcggtcagaccacaagcacc
acgggtggtttcggttcgacgggctcgacgttcggacagcctgcacagcaaaatacgggc
ttcggcgctaagcccgcgggcggtctcttcggcagcacctctgggaccacgagcggcttt
ggcaacaccagcggtggctttggtagcacgtctggcggattcggtcagcagaacaacacc
ggcagtgtgttcggtcaacagcagaacgcgaacaccggcggctttgggcaggctgccaat
accaacactggtggtggcctgttcggccagcagcagaacaacacctcatctggtggtctt
ttcggcagtgcgaacaacaacaccacctccggctttggccagaacaaccagcagcagggt
accaccaccggattcggtggattcggcgccaagcctgcctttggctcgacgtcgacgacc
tcgactggttttggccaaaccaacaacgcgactggtttcggccagaccaacaccgggtct
actgggttcggattcggtcagcagaaccagcagcaacagcagcagcctcagcaaagcacc
ggaggtctcttcggcagcacaaccaacaacgccttcggtcagaacaacgcccagcagaac
aacacgcttggtggaggcacgtcgctctttggtcagaacaaccagcagcagaccaatacc
actggtggcctgttcggaaacaccgctaacaagcctgccggtggactgttcggatcgacg
cccgctgctacgactggcaccacgggaggtttcggcggctttggacagaacaacaccacc
accactacccagccggctaccggcggactctttggcaacaatgcggcgacgacgactggc
acgactggcggcggtctgttcggcaacaccaccaataccacgacgacccaacctgcagcc
actggcggtctgttcggtaacaccaccaacactgcgtccaccggaggaggtcttttcggc
gccaagcccgccaccactacaggcggcctgttcggatctacaaccaccacgcagcctgcc
actaccggcaccggctttggcggcttcggtcagcagcagaacaacgccacgactggtggc
ggcttgttcggtaatacggctgcaaacaaccaggcccaggccaagcctgctggcagcctc
tttggcgggggtggctcgtccctcttcggcgctcagaacaaccaacagaccacacaacct
gctgctggtggcagtcttttcggtggtctcaaccaatctcagccggccgcgacgggtggt
ctgtttggcagcactgcctcgactactcagcctgctgctggccagactggtggcctattt
ggcagcactctgggccagtcgactgctcagcagccgtccctcacggcgtctgttgaccag
aacccgtatggcaagaacgagctcttcgcttattccggacagaagcttgaggtcggcagc
accaacaagaagcctgccctgcctcctttgaccgcctcttcgtaccgtgtcacccccagc
aagggccgcgtagtgaagcttcgtgggttcgcctcaccgctcaacgcttctcagtcatcg
ggtcgcgcctccagcccctcgcttgcctcccccagccgttccgtcattggttcccccgct
ccttccgaccgttacaacggtctgactgacgctgcactctcgcccaacgctttcattccc
cgccccaacgttaagaagatcacagttacccccaaggccaacgcagtgaacagcgaggac
ccgctggagtctgttctgggcaagtctcagctgcgcggttctgtcaatggaaacggcacg
cctgcaactcccgaccaaggttccaagagccccaccctgtccatcagcaacggacgggca
ctgaccggtgacgacacgcctactcgccgctctcagcctattgcgcaggagtccatccgc
gccgttaccgctgagcgaccgctgaaacgtggtgactactggtgccgcccgaagctcgag
aagctgcgatccctttctcaccaggaactctccaagctcgagaacttcaccgtgggtcgc
aagggttatggtgaggttacgttcctccagcccgtggacctcacggatctgccctcgctt
caggacctctttggcaagaccgtcatcgtcgaggatctcgagctcacagtctaccctgac
gacagcaacaagccccctcgcggtcagggcctcaacgttcccgcccagatctctctggag
aattgctttgcccgtgacaaggccactcgacagcccatcacagaccccaacgaccctcgc
taccgccgccagatcaagcgcgtgaaggctgttcagggaaccgagttcgtcgacttctct
gatgacggtatctggacgttcactgttgagcacttctcccgctatggtcttgccgatagt
gacgaggagtctgacgagggcatgaatgactcgccttcgactgggaagggcaagcagctg
tcacccgactccacgattgagggggagactgagtcggaggaagatgatttccttccgccc
accaagtctatgcacgatcgcgacgtcgacatgaaccacgacagcggactcgaggagacc
ggcgactcctatgacgaagcggacgaggaggaagatgatgagagcttcgtctcggagagg
cgttgggagaaccctgtcaccaataatttggatagcccgggcattcggagagttcgtctg
atgcagtcgaacttcttcgccaatcaggaagtcgccgctccggccgttagcgcggcggaa
gctcagcgtacgcgggctctcgaggctgcacgagcgctgcagcgtgggcgtgccgaggcg
ggttttggtgaagccgaggaggacatgaacgagcttgacgaccgggccgtcaagcgcgcc
tctttcggcgagcttgcgagcccgcctccccgccaaccaagaaagtacgccaaggttccc
ttggccgaaagttctgtcaacggcaatgagggtgtccgccctgatacgggtttggctctc
ggccgctcgttcaggtgcagctggggacccaacggagaacttgtccacttcggcaagatc
tgtgctccgaaggaagagtacaaatcgccttcggacgcgactgtgttcgtccagcaggtg
gacctgctcgccgactctccagagattgagcgaccaaaggctgaccgccttctttcgctt
ctcctcgacaactcccagattgagcaggttgacggcacgcccatggccatgacgtctact
gagatccgcttcaaggagtttgcgcgacttttcgacgagggagaccgctcacatgaggcc
accatctggcgattgggcaaggctcttttcgacgagatcgacctgcgcctacccgccgat
actcccgacgatgtccgggagcgggtcttccaggttcgacggaagcttgcgttgtccaag
tggctggaggacgcagtagcacctgccgttgatggagatttggcggcggctggtgacaac
cgacccgctaagctgttcagcctactcaccggcaatcaaaccgatcgtgctgtccaatca
gcactggacggaaaggacatgcgtcttgccactctggtgtctcaggctggcggccctgag
gtcttccgctcagaggttcttcgccagctcgacgactggaccaagttcaaggcgaactct
gtcattgggtacgactaccgtcggctctacgctctcctggccggtatcacggacgtctcg
aagggcgactctagtcgtggagctgacgccgctcccgacgttctcgtcgctgagggtctg
gactggaagcgtgccttcggcctgtacctgtggcacgggcgcccgttcgaggagacgatc
ggacaagtgttcgaggcctacacccatgcacttgacgacgctcacccccctgcgaagcct
atcccgccatacctcgagaagccggacggggagcgggagtggaacatggccaccaagccc
acggacgtgctgtgtaacttgattcgcatgtttgtcgatctgacggttccccttgaggag
gtcctttcggcgcgcggctgctctcccagccccacagacttgcgacttccctggcacctt
tacctccttctcactcaggcgctggaggctcgagacttctctgatcgcgaggagcccaat
gccgaaggcattgcgttcagtgctagtgcgaacgagctgacgcgctcttacgccgctcag
ctggaggaggaaggccagtggacgtgggcggcctttgtgcttctgcacctcgagcttccc
gaggcgcgtcgcaacgcggttcgcgagctgctgttccgacacccgaacccgaataactct
gagcgcatgttcctcgtgaacaccctcaggatccctccagcgtggctgcacgaggttaaa
gccgctgagttcgccaccgagaacgacccgtaccgcgagtacttcgagctcatccgtgct
ggtctcgccgaccgtgctcagcgccttctcatcacgaagctcgctcccgaggctatcctg
cgcgacagccagtcactcctgcgtagactttgcgaggcgctcgagcccctccatcctact
ggctgggaatacggtggcaagctgttcctcgactacctgaacatcatcaacgacaccaag
ccgctgctggcctctgttcttcgcgccggcctgcatcctgatcccgtcgaggatgcggag
ctcaaccgtctgtgcaagagcgtgccgcgcgtcatccaacttctgcccgcgctcttcccg
aacaaggacgacgtgcagcaggtcgccagtctgagcgagatgcttagcaacctccagaac
ctgggcgctgttctccacatgaacaaccgcatcgagcggccgccaatctctgacctcctt
gtcgacaaggaccgcctccacctccttcagggcgctgccaccgagtctttcgagcgctct
ctctccgccatcatggcctaa
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