Trichosporon asahii var. asahii: A1Q1_05338
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Entry
A1Q1_05338 CDS
T06566
Name
(RefSeq) pre-mRNA splicing factor
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
A1Q1_05338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tasa03041
]
A1Q1_05338
Enzymes [BR:
tasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
A1Q1_05338
Spliceosome [BR:
tasa03041
]
Complex C
Other components
Step II factors
A1Q1_05338
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
S1
DEAD
AAA_22
nSTAND3
AAA_19
AAA_16
T2SSE
PhoH
NB-ARC
ABC_tran
TsaE
Motif
Other DBs
NCBI-GeneID:
25988850
NCBI-ProteinID:
XP_014177545
UniProt:
J6ETP4
LinkDB
All DBs
Position
Unknown
AA seq
1202 aa
AA seq
DB search
MGADKELYKLELLSLVSRVAQELFNHTKLQDKSLAEFVIASKNVDEFTKKLKEIGADFPE
SFIKNLDRLIATMHPKYKRKAAKAKAKAAAGKGKSDVGESNDEKAIKARKFPGLSMPDQE
MKPEDTYLGGREGKDARDVDHDFSLDNTMAELEKAASRRNRPAADDFMDGEPSGKRMRYD
DRDSGYDRRGRDRYDDRRRDRDDDAGYGIRDNGWAGRGGRPAPPEERRGRSGLDDAPVLY
KIYNGTVTGVRDFGAFVRLDGVAGNQEGLVHVSNITGARLETASEGVRRNQRVKVKVISV
AGNKFGLSMKDVNQETGEDNTPHLRVKSREEMEAEQRRMAARVGTGANAAPLHSSSMPMD
QKRSAKRLTSPERFEIKQLIASGAVSAADYPDLDDDFNASNNNPEIDEDVDIEVAEKEPA
FLAGQTKITLDISPVKIVKAPDGSLNRAALAGGQLAKERAEMRRMEANEQADKEAKNLAT
PWLDPMAQASDRQFAADLRTNQQGQRQQQVPAWKKANKSTTFGKITTMSIAEQRRSLPVY
KLRDQLVKAVRENQILVVVGDTGSGKTTQIAQYLAEDGLLEHGKLGCTQPRRVAAVSVAK
RVSEEVGCRLGSEVGYTVRFEDVTSPETKIKFMTDGMLLRELLIDPDMSRYSVIMLDEAH
ERTIATDVLFGLMKKACKRRPDLKLICTSATLDAEKFATYFWGCPIFTIPGRTFPVEILY
TKDPEPDYLEASLITILQIHLMEPPGDILLFLTGQEEIDTACEVLYERVKALGPQVPELI
ILPVYAALPSEMQSKIFDPPPPGARKCVIATNIAETSITIDGIYYVIDPGFSKQNAYDPK
LGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTEIAYRNEMLPNPIPEIQRTNLAST
ILTLKAMGINDLINFDFMDPPPAATMLTALEQLYALGALDDEGLLTRVGRKMADFPLDPS
LCKVLIKSVDYGCSEEVLTIVSMLQAGGQIFYRPKDKQQQADAKKAKFHQPEGDLLTLLA
VYNGWKASKFSNPWCFENFVHTRALKTAQNVRKQLVGIMDRYKHDLVSCGTNYNRVRMAI
CSGFFRNAAKKDPVEGYKTLVEGTPVSIHPSSALFQRPPEWCIYYELILTSKEYMSQVTV
IEPKWLSEVAPTFFKVADQNRISKRKQKEKIEPLFDRFAESKDSWRLSKQKRPIKNSQTF
GS
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgggagcggacaaggagctttacaagctcgagcttctgtcgcttgtctcgcgagtggct
caggagctgttcaaccacactaagctccaggacaaaagtctcgccgagtttgtcatcgcg
agcaagaatgtcgacgagttcacaaagaagctgaaagagattggcgccgacttccccgag
tctttcatcaagaacctcgaccgcctgatcgcgacgatgcacccgaagtacaagcgcaag
gccgcgaaggccaaagccaaggctgctgcaggcaagggcaagagcgatgtcggcgagagt
aacgatgagaaggcgattaaggcgcgcaagttccctggactctcgatgccggatcaggag
atgaagcccgaggacacctacctcgggggccgcgagggtaaggacgcgcgagatgtcgac
cacgatttctccctcgacaacacgatggccgagctggagaaggcggcttctcggcggaac
cgacctgcggcggacgacttcatggatggcgagcccagtggaaagcgaatgcggtacgac
gatcgcgacagcggctacgaccgccggggacgagaccgctacgatgaccgaagacgggac
cgcgacgatgacgccggctacggtatcagggataacggctgggcgggacgcggcggacga
cctgcgccgccggaagagcgaagagggcgatctggacttgacgacgcccctgtgctgtac
aagatttacaacggtaccgtcacgggtgtgcgcgacttcggagctttcgtccgcctcgat
ggcgttgcgggcaaccaggagggtctggtccacgtgtcgaacatcacgggtgcccgactc
gaaaccgcgagcgaaggcgtgcggagaaaccagcgcgtcaaggtcaaggtcatttcggtg
gcgggcaacaagttcggtctcagcatgaaggacgtcaatcaggagacgggagaggacaac
acgccgcatctgcgtgtcaagtctcgggaggagatggaggctgagcagcgcaggatggcg
gcgcgcgtcggtaccggtgccaatgctgcgccccttcactcttcctctatgccgatggac
cagaagcgcagcgccaagcggttaaccagccctgagcgtttcgagatcaagcagctcatc
gcttccggtgctgttagcgccgcggactacccggatctcgacgacgacttcaatgcctca
aacaacaacccggagattgacgaggacgttgacatcgaggtggccgagaaggagccggcg
ttccttgctggccagaccaaaatcacgcttgacatctcaccagtcaagatcgtgaaggcg
ccggacggatcgctcaaccgagcagccctcgccggagggcagctcgcgaaggagagagcc
gagatgcgccgcatggaagccaacgagcaggcggacaaggaggctaagaacctggccact
ccgtggttggatccaatggctcaggcttccgatcgacagttcgccgccgacctgcgcaca
aaccagcagggacagcgtcagcagcaggtgcctgcgtggaagaaggcgaacaagtcgacg
acgtttggcaagatcacgacgatgagtattgcagagcagcgtcgctccctgcccgtctac
aagctgcgtgaccagctcgtgaaggctgtccgcgagaaccagattctcgttgttgtcggt
gacacgggatctggaaagacgactcagattgcgcaatacctcgccgaggacggcctactg
gagcacggcaagctcggatgtacgcagccccgtcgtgtcgccgctgtctccgtcgcgaag
cgtgtgtctgaggaggtaggatgccgcctcggttcggaggtcggttacactgtccgtttc
gaagacgtcacatctccggagacgaagatcaagttcatgacagatggtatgcttctgcgt
gagctcctcatcgaccccgacatgtctcgatactccgtcatcatgcttgacgaggcgcac
gagcgcacgatcgccactgatgtcctcttcggtctcatgaagaaggcatgcaagcgccgc
ccggacctcaagctgatctgtacgtcagccacgcttgacgccgagaagttcgcgacgtac
ttctggggctgccccattttcaccatcccggggcgaacattccccgtcgagatcctctat
acgaaggatcctgagcccgactacctggaggcttcgctcattaccattctccagatccac
ctgatggagccgccaggagacattctcctcttcctgactggtcaagaagagatcgacacg
gcatgcgaggtgttgtacgaacgagtgaaggcgctaggaccacaagtgccggagctcatc
attcttcccgtctacgctgcgctgccatcagagatgcagtccaagatcttcgacccgccg
cctcccggtgcgcgtaagtgtgtcatcgccaccaacattgcggagacgagtatcacgatc
gacggtatctactacgtcatcgaccccggattctctaagcagaacgcctacgaccccaag
ctcggtatggactcgctcattgtcactcccatctctcaggcgcaggctcgtcagcgttca
ggacgtgccggacgaacgggccccggcaagtgctaccgcctgtacacggaaattgcgtac
cgtaacgagatgctgccgaacccgattcccgagattcaacgtacgaacctcgcgtccacc
attcttaccctcaaggcgatgggtattaacgacctgattaacttcgacttcatggaccct
ccgccagcggcaaccatgttgacagcgcttgagcagctgtacgctctcggtgcccttgac
gacgagggtctccttactcgcgtcggtcgcaagatggccgatttccctctcgacccgtcg
ctgtgtaaggtgttgatcaagtctgtcgattacggttgttctgaggaggttctcaccatt
gtgtccatgcttcaggccggaggccagatcttctaccgcccgaaggacaagcagcagcag
gcggacgcgaagaaggcaaagttccaccagcctgagggagacctgctcactctcctggcg
gtgtacaacggctggaaggcgtccaagttcagcaacccgtggtgcttcgagaactttgtg
cacacgcgtgcgctcaagacggcgcagaacgtacgcaaacagcttgtcggtatcatggac
cggtacaagcacgacctcgtgtcgtgcggcaccaactacaatcgcgtgcgcatggcgatt
tgctctggcttcttccggaatgcagcgaagaaggacccagtcgaaggatacaagacgctc
gtcgagggtacgcctgtgtcgattcatccgtcgtccgccctgttccagcgtccgccggag
tggtgcatctactacgagttgattcttacgagcaaggagtatatgtcccaggtgaccgtg
atcgagccgaagtggctgtccgaggtcgcgccaacgttcttcaaggtcgcggaccagaac
cggatctcgaagcgcaagcagaaggagaaaatcgaaccgctgttcgaccgcttcgcagag
agcaaagactcgtggcgtctcagcaagcagaagcggccgatcaagaactcgcagacgttc
ggctcttag
DBGET
integrated database retrieval system
