Trichosporon asahii var. asahii: A1Q1_05536
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Entry
A1Q1_05536 CDS
T06566
Name
(RefSeq) ATP-dependent rRNA helicase
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
tasa
Trichosporon asahii var. asahii
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tasa03009
]
A1Q1_05536
Enzymes [BR:
tasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A1Q1_05536
Ribosome biogenesis [BR:
tasa03009
]
Eukaryotic type
Pre-60S particles
Helicases
A1Q1_05536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
25989048
NCBI-ProteinID:
XP_014177688
UniProt:
J4U700
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MPQPPGAAWDSLKPGLTDWIAEVIAQQGWERMTPVQAGSIPRALKNQDCVVEAVTGSGKT
LAFVIPVLERLVRNEHKYKKGEVAALVIAPTRELASQIYDVFNLFLSSIQPPEPEVEEGE
TPPPVEPAPYSLPTLVTSGTEKPYDTFLERSSNIIIGTPGRLANFLLAPRGLSAVKVSNL
DVLVLDEADRLVSSPDHRRDVERIIKHLPKQRRTHLFSATMTDAIEDLIGLGLRNPVRIV
VNLKDKRAKKEGEERRIPLGLQNTYTVCEPADKTLQLVRNLKREAEKHQNAKFIVYFSTG
AAVDYFYRVLSKIPQLENFSLTSLHGDLPPRVRDQALSAFTSHPSSHLSPAVLLCTDLAS
RGVDFSDIDCVVQYDTPTDPKTFSHRVGRTARAGRSGKAILLLTKGREEEYIELLRVRKI
PLVGVEPLGADLEPRTVSEEASVEAERVDPASLELMEEIRSLALQDRDLFDRGARAFVSS
VKAYSKHEAGFIFRVADLDFNAMAIAFGLLRLPAMPEVRDWKKRDAKLKEKYEAAVAKDA
EPSEPAEKKEGQEEEEKELPKYTPPVPFAEAEVDWDTYAYASRQREAARQAELVTKAANR
EKDAEEREKRAKKRKIEKELRSAWSNQKERKVARLDRREKRDLKKKREWERKQIEAGEEV
ERADVQLSKKKRKEQAEEDEDWEGDYKALRREVDEERTSRKGNKKDNIGGMFDDLD
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagcctccgggagccgcgtgggatagcctgaagccgggactcaccgactggatt
gcggaggtcatcgcgcagcagggatgggagcgcatgacacccgttcaagcgggaagcatc
ccgagagcgctcaagaaccaagactgcgtggtcgaggctgtgactggttcaggcaagacg
cttgctttcgtgattcctgtcctggagcgccttgtccgcaatgagcacaagtacaagaag
ggagaggttgccgcgctcgtgatcgcaccgactcgcgaacttgcttctcagatttacgat
gtgttcaatcttttcctcagctctatccaaccgccagagcctgaggtcgaggaaggggag
acgcctccgccggttgagcccgcgccttactcgctccccacgctcgtgacctcgggcacg
gagaagccgtacgacaccttcctcgagcggagctcgaacattattatcggtacccccgga
cgacttgcgaacttcctgctcgctccccgcggactgagcgccgtcaaggtgtcgaacctg
gacgtgctggtgctggacgaggcggaccgattggtgtcttctcccgaccacaggcgtgac
gtcgagcgcatcatcaagcatcttccgaaacagaggcgcacgcacctgttctccgcgacc
atgacggatgccatcgaggacctcatcggccttggtctgcgcaatccggtccgtatcgtt
gtcaatcttaaggacaagcgcgcgaagaaggaaggcgaggagcgcagaatcccgctgggt
ttgcagaacacgtacaccgtctgcgagccggcggataagacgctccagctcgtgcgcaac
ctgaagcgtgaggctgagaagcaccagaatgccaagttcatcgtgtatttctcgaccggc
gccgccgtggactacttctacagggttctctcaaagatcccacagctggaaaacttcagt
ctgacgtccctgcacggcgaccttcctcctcgcgtgcgcgatcaggcgctttccgccttc
acatcacacccttcgtcacacctctcacctgctgtgctgctgtgcacggatctggcttct
cgcggcgttgacttctctgacattgactgcgtcgtgcagtacgacacgccgacggacccg
aagacgttctcgcaccgtgtcggtcgaacagcccgcgcgggacgaagtggcaaggcgatc
ctgttgctaacaaaggggcgggaagaggagtacatcgagctcttgcgggtacgcaagatc
ccgctggtcggtgtcgagcccctcggtgctgatctcgagccccgcaccgtctctgaggaa
gcgagtgtcgaggcggagcgcgtcgacccagcaagcctggagctgatggaggagatccgc
tccctggcactccaggaccgcgacctgttcgatcgtggtgcccgcgccttcgtgtccagt
gttaaggcgtactcgaagcacgaggccggcttcatcttccgcgtcgccgacctcgacttc
aacgcgatggcgattgcattcggcctgctccgcctccctgccatgccggaggtgcgcgac
tggaagaaacgcgacgccaagttgaaggagaagtacgaggctgcggtcgctaaggacgct
gagccctccgagccggctgagaagaaggagggccaggaggaggaggagaaggagctgccg
aagtacacaccaccggtaccctttgccgaggccgaggtggactgggacacgtacgcctac
gcgtcgaggcagcgcgaggctgcccgccaagctgagctcgtgaccaaggctgcgaaccgc
gagaaggatgctgaggagcgcgagaagcgcgccaagaagcgcaagatcgagaaggagctg
cgctccgcttggagtaaccagaaggagcgcaaggtcgctcgcctggataggcgggagaag
cgcgatctcaagaagaagcgcgagtgggagcggaagcagatcgaggctggagaggaagtt
gagcgcgcggatgtgcagctcagcaagaagaagaggaaggaacaggccgaggaagacgag
gattgggaaggtgactacaaggctctgcgacgagaggtcgatgaggagcgtacgtccagg
aagggcaacaagaaggacaacatcggcggcatgttcgacgatcttgattag
DBGET
integrated database retrieval system
