Trichosporon asahii var. asahii: A1Q1_05934
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Entry
A1Q1_05934 CDS
T06566
Name
(RefSeq) hypothetical protein
KO
K06100
symplekin
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
A1Q1_05934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tasa03021
]
A1Q1_05934
03019 Messenger RNA biogenesis [BR:
tasa03019
]
A1Q1_05934
Transcription machinery [BR:
tasa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
A1Q1_05934
Messenger RNA biogenesis [BR:
tasa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
A1Q1_05934
U7-dependent histone pre-mRNA processing factors
A1Q1_05934
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT_2
AbiEi_3
Motif
Other DBs
NCBI-GeneID:
25989446
NCBI-ProteinID:
XP_014176618
UniProt:
J6ESA1
LinkDB
All DBs
Position
Unknown
AA seq
1057 aa
AA seq
DB search
MSLYADDEDLYPSLPGSTVSAAPTDPLQALAAAVQATPETPEQADALQAAGTRFEDHPDK
LPEVIEKLLPMVVEGPDSLLRAWTLDMLALTVGRAGLRTEVKMDELSSQSSRRFIPCSSG
ISKLYDVFQTSKARILSLVLDPGARPQNVGIKAAAWKYIQRVLLVGVRAGGDPRLQARSN
DVSVALIQPGSLLNPAKIEEEANLLRTQLVTQLYGLDDPAILAPIINTFPPLVKQRPALA
PLIVQSMAAWTPSAMEAARRPPMQIRSVEKTMRAVMAHIARHPPLVGFSAQLHDALGRQK
QRMEMAYAADADARRQRRANMAAARAGKHPLESEAESSGSAAKRARMEVLLGSGDGKGSV
MFDVSQLALEPVIDAVVAALGAASDDFLTRACEAGRQAILDDHPDAVQALAPALLRAEDR
EDAVVNPLEMLDDDDDELLLEPMEDELEQQVTIADFRLPPPEPLPETEKEEVVDFAVRRI
WDTGADLSHLADLKISDAPRSAVQPREIWMLLLARISSRGGEDKRKLIGEFVAKDFSSRS
KFATVWLNEEWLAKRRGRDNQYDAGLMAILTAYIPTLDAKDTSLSQFLLGLPELPESAID
AIEPLCEDPERMIVGFRALKELAEARPPLRPRAVQTLLQFCTHPERKVRVMAITTVRSWV
PNFPMSEAVVKYALGVLKRLATAKVREPPKPEPEEGEDGEKKPETEGEAAEETKPDVEMD
SGAEPEPEPEQPEDPDAVQSKYLGEVDQDTVSQYVELPFALSRRDQDLLDDIFALYPKLS
PSVQKSVETMLIPLIRSLGPTKKLLEILRTFPNGAERLAFRVVTVLSAEGSGQLLAPVVR
QLMAERQVDPRFVIPIINVLDKAEIEAQIPRIVALLDSPEAEDEVRGAFAAALQKMTPAD
LLVTLHNEQAGLNATKAAIRICFTMTTVFRSDVLANAMQRIVDLHPEQGADALPKVFIRT
IIQALKPYKSLVPFVANNIIPKLIGRKIWENPELWEGFSLLIRMLGQASFGALLQMPIEQ
IRQIIEKQPALKAPLKTFLANKPAARNSLAAIFEEKK
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctctacgccgacgatgaagacctctacccctcgctccccgggagcaccgtctcg
gcggcgcccacagacccccttcaggcgctcgcggccgcggtgcaggctaccccagagaca
ccagagcaggccgacgctctccaggccgccggcacacgattcgaggaccacccagacaag
ctccccgaggtcatcgagaagcttctgcccatggtcgtcgagggccctgactcgctcctc
cgagcttggacgctagacatgctcgcgctcacggtcggacgggcgggtctccgaacggag
gtcaaaatggatgagctgtcatcccaatcttcgcgacggtttatcccatgctcttccggc
atctcgaaactgtacgacgtattccagacatcgaaggcgcgcatcctgtcgctcgtcctc
gaccccggcgcgcgaccgcaaaacgtcggtatcaaggcggcggcttggaagtacattcag
cgggtactgctggtcggagtgcgagcgggtggtgacccccgactgcaagcgcggagtaac
gacgtgagcgttgctctaatccagcccggctcgctcctgaacccagccaagattgaggag
gaggcgaacctgctccgaacgcagctcgtgacacaactgtacggactcgacgaccccgcg
atcctcgctccaatcatcaacaccttccctcctctcgtgaagcagcggccggcacttgcc
ccgctcatcgtgcagtccatggcggcatggactccgagtgcgatggaggcagctcggcga
ccgccgatgcagatccgcagtgttgagaagacgatgcgtgcggtcatggcgcacatcgcc
cgtcatccgcccctcgttggtttcagcgcgcagctgcacgacgctctcggaaggcagaag
cagcgcatggagatggcgtacgccgcggacgctgacgcgcggagacagcgacgtgccaac
atggccgctgcgcgggctggaaagcatcccctcgagtctgaggcggagagcagcggaagc
gcggccaagcgcgctcggatggaggtacttctgggaagtggagacgggaagggctcggtc
atgtttgacgtttcgcaacttgcgctcgagccagtcatcgatgccgttgtggcagcgctc
ggagcggcgtcggacgacttccttacccgtgcatgcgaggcgggccggcaagcgatcctg
gacgaccatcctgatgccgtgcaggctctagcacctgcgctcctgagggcggaggacaga
gaagatgcggtggtgaacccgctggagatgctggacgatgacgacgatgagctactcctt
gagccaatggaggacgaactcgagcagcaggtgacgatcgccgacttccggctgccgcca
cccgaaccgcttccggagactgagaaggaggaggttgtcgactttgccgtgcggcggata
tgggacactggcgccgatctttcgcatttggccgacttgaagatcagcgatgcgccgaga
agtgcggtgcagccgcgtgagatctggatgcttcttctagcccgtatctcgagtcgagga
ggggaggacaagcgcaagctgatcggcgagtttgtagccaaggacttctcctcgcggagc
aagtttgcgaccgtctggctgaacgaggagtggctcgcgaagcgccgcggacgagacaac
cagtacgacgctggtctcatggcgatcctgacggcgtacattccaaccctggatgcgaag
gacacgagtctgagccaattcctcctcggtcttcctgagcttccggagagtgcgatcgac
gccattgagccgttgtgtgaggatccggagcgcatgattgttggcttcagagcgctgaag
gagctcgccgaggctcgcccgcctctccgtccccgcgcggtccagacgctgctccaattc
tgcacgcatccggagcgcaaggtccgcgtcatggccatcacgacggtgcgctcgtgggtg
cccaacttccccatgtcggaggctgtcgtcaagtacgccctcggtgtgctgaagcgcctc
gcgacggccaaggtgcgggaaccgcccaagcccgagccggaggagggcgaggacggggag
aagaagccggaaacggagggcgaggctgcagaagagacgaaaccggacgtcgagatggac
agtggagccgagccagagccggagccagaacagcccgaggaccccgacgcagtgcagtcc
aagtatctcggcgaggtggaccaggacacggtgtcgcagtatgtcgagctgcccttcgcg
ctgtcgcgtcgcgaccaggacctgctcgacgacattttcgcgctgtacccgaaactgtcg
ccgagcgtgcaaaagagcgtcgagacgatgctgatcccgctcatccgctcgctcggcccg
acaaagaagctgctcgagatcctgcgcaccttcccgaacggcgcggagcggctcgccttc
cgtgtcgtgacggttttgtcggcggagggcagcgggcagctgctcgcgccggtcgtgcgc
cagctcatggccgagcggcaggtggacccgcgcttcgtgatccccatcatcaacgtgctg
gacaaggccgagatcgaggcgcagatcccacgcatcgtcgcgctcctcgacagtcccgag
gccgaggacgaggtgcgcggcgcctttgccgcggcactgcagaagatgacgcctgcggac
ctcctcgtcacgctgcataatgagcaggcagggcttaacgccacaaaggcagccatcagg
atctgcttcacgatgacgaccgtgttccgctctgacgtgctcgcgaacgcgatgcagcgc
atcgtcgacctgcaccccgaacagggtgccgatgccttacccaaggtcttcatccgcacc
atcattcaggcgctgaagccgtacaagagtcttgtgccctttgtcgcgaacaatatcatc
ccgaaacttattggacggaagatttgggagaacccagagctctgggagggcttctcactc
ctcatccgtatgctcggccaggcatctttcggcgccctcctccagatgcccattgagcag
atccgccagatcatcgagaaacagcccgcgctcaaggcgcccctcaagacgttcctcgcc
aacaagcccgcagcgcgtaactcgctcgcggccatctttgaggagaagaagtga
DBGET
integrated database retrieval system
