Trichosporon asahii var. asahii: A1Q1_05956
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Entry
A1Q1_05956 CDS
T06566
Name
(RefSeq) hypothetical protein
KO
K12876
RNA-binding protein 8A
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03013
Nucleocytoplasmic transport
tasa03015
mRNA surveillance pathway
tasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
A1Q1_05956
09122 Translation
03013 Nucleocytoplasmic transport
A1Q1_05956
03015 mRNA surveillance pathway
A1Q1_05956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasa03019
]
A1Q1_05956
03041 Spliceosome [BR:
tasa03041
]
A1Q1_05956
Messenger RNA biogenesis [BR:
tasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
A1Q1_05956
Spliceosome [BR:
tasa03041
]
Complex C
Other components
EJC/TREX
A1Q1_05956
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
DUF7153
eIF-5_eIF-2B
Nup35_RRM_2
CBP66_1st
Motif
Other DBs
NCBI-GeneID:
25989468
NCBI-ProteinID:
XP_014176640
UniProt:
J4U632
LinkDB
All DBs
Position
Unknown
AA seq
133 aa
AA seq
DB search
MADVDMDTGSSTHTVANMAAVEGWIIIVTNLNEETTEEDLEDHFADFGNVKNLSMALNRR
TGYVMGYALIEYATKEEAEAAIKATNGTEFLEKKINTDFAFAKPPAGAGGGRRDRAPGRR
GGGRDRSVSPGRR
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgttgacatggacactggatcttccacacacactgtagctaacatggcagcc
gtcgaggggtggatcatcatcgtcacgaatctgaacgaggagacgaccgaggaggatctc
gaggaccactttgccgactttggaaacgtcaagaacctctccatggcgctgaaccgtcgt
accggatacgttatgggctacgctctcatcgagtatgcgaccaaggaggaggccgaggcg
gcgatcaaggcaacgaacggcaccgagttcctcgagaagaagattaacaccgactttgcc
tttgccaagcccccggcaggtgccggtggaggacgacgcgaccgtgctcctggaaggcgg
ggaggagggcgcgaccgctctgtgtctccgggacgtcgatga
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