KEGG   Trichosporon asahii var. asahii: A1Q1_06259
Entry
A1Q1_06259        CDS       T06566                                 
Name
(RefSeq) hypothetical protein
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
tasa  Trichosporon asahii var. asahii
Pathway
tasa03022  Basal transcription factors
tasa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tasa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    A1Q1_06259
  09124 Replication and repair
   03420 Nucleotide excision repair
    A1Q1_06259
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tasa03021]
    A1Q1_06259
   03400 DNA repair and recombination proteins [BR:tasa03400]
    A1Q1_06259
Transcription machinery [BR:tasa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     A1Q1_06259
DNA repair and recombination proteins [BR:tasa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     A1Q1_06259
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 25989771
NCBI-ProteinID: XP_014183338
UniProt: J5RE69
LinkDB
Position
Unknown
AA seq 323 aa
MAERGEKEKEKAPVSPITLEDFATVLMVFLNAHLASRWGNEVVVYGALPGSAIDINRRRP
PEVAATSLVAHDNDPSKNSNPEAEESRILILNATPGGAEDAEATDSKTAKASGGGGGQRG
YVGLMNCVFAAQKAVSLTAVEDELTCQKVAIDVLTLPPESTMTAPPIFLQQAAYLTEGIY
WRWNGRGGLLQYLHVSLLVPSVSADPQSMYLPPPSLRNKPFTVPPQDAVDFRAVCFCHHD
VVDVGFVCIFCEVKPICSMCKTKFPLTSLARLKQLAAHLQPIPIPATVPPPKQKKGPNSG
VAQSPVTNKAPPTLPDADVIVVD
NT seq 972 nt   +upstreamnt  +downstreamnt
atggcggaacgaggagagaaggagaaggagaaggcacccgtgtcgcccatcacgctggaa
gactttgcgactgttctaatggtctttctgaatgcccatctcgctagccgatggggtaac
gaggtggtagtctatggtgctcttcccggctcagcgatagacatcaatcggcgccgtccg
cctgaggtcgccgcgacgtcgctcgtggcccacgacaacgatccgagcaagaacagcaac
ccggaagctgaggaatcacggatattgatcctcaacgcgactcctggtggggctgaggat
gcggaggccactgactcgaaaactgccaaggcttccggaggaggaggcgggcagcgagga
tacgttggtctcatgaactgcgtctttgctgctcagaaagctgtgagcttgacggcggtt
gaagatgagctgacctgtcagaaagtcgcgatcgatgttttgacgctaccgccggaaagc
accatgacggcgccgccgatcttcttgcagcaggctgcgtacctgacggaggggatatac
tggcgatggaacggtcgaggcggattgctgcagtacttacatgtaagcctcctcgttcct
tccgtgtcagctgacccacagagcatgtaccttcccccgccgtccctccgcaacaagccg
ttcactgttccacctcaagacgcggttgactttagagctgtgtgcttctgtcatcatgac
gtggtcgacgtcggctttgtctgcatcttctgcgaggtcaagccaatctgttcgatgtgc
aagacaaagttcccgttgacgtctttggcgcgactgaagcagctggctgcccacctccag
cctattccgatcccggcaacggtgccgccgccgaaacagaagaagggaccgaacagcggc
gtcgcccagtcacctgtcacgaacaaggcgccgcccacgctgccggatgcggatgttatc
gtggtcgattag

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