Trichosporon asahii var. asahii: A1Q1_07058
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Entry
A1Q1_07058 CDS
T06566
Name
(RefSeq) hypothetical protein
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A1Q1_07058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasa03019
]
A1Q1_07058
Messenger RNA biogenesis [BR:
tasa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
A1Q1_07058
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
Erythro_esteras
Motif
Other DBs
NCBI-GeneID:
25990570
NCBI-ProteinID:
XP_014182782
UniProt:
J5TML1
LinkDB
All DBs
Position
Unknown
AA seq
906 aa
AA seq
DB search
MASGNGSKSKGKKAASSSKPSSKPSSRAQSEGSPSAPGPVPNPSTDFAGFVDNMTKALEA
STSAAAGFPDKSDLAFHRTLDRKFAKGLDATGQRVLDLTDRLLQLAVEGSQEKTKAAGGK
VKPRRKVTDEDDVVDSFQATVIEFIDALLEDAVGSGCRTLLTLKDSNLDEVNGKKQKAAI
DIKPSLAAKAGQKLPGPFSQTSQARLPTHLFNAPGIAKPQLLFQDGVDNSPDARWSPTLP
VKEHAMVPLGHTISEDDSWPMGEMDDDPKKVAARREKIAKFEQHPYYYETRHLPYPTSMF
TSSTPIRPKSFEDTPFEFIDTPEQLAALTETLKKAKEIAVDLEHHNQRSYYGFTCLMQIS
TREGDWIIDTLALRAELREHKLGHVFADPSVVKVFHGADSDIVWLQEDFDIYIVNLFDTY
HATKVLEFPKFSLASLLQLYCDFEPDKRYQMADWRIRPIPDEMMKYARSDTHFLLFIYDN
LRNALIARASRTPSPSVEGQTPKPNPQRAMRKVLDLSSETALKLYQRDGYDPVKGQGMNG
WANLSKKLGKKDVMKEEVLIQLSHLRPNNASVLARTLVHQSAEAYARADEIAEVIKNAAA
AFRARSPSKSPSKSLTPLSGTTSRAQSVVTATKKSTKAAGPVIDVWAGIGTGAGAPSSSA
LFGSTLTKKTASPSKNSQKASSSLFGSTLSTPGGGRSSRKASPGFNAVQSSIFSALAPAV
AAPKVEVEAPGSSLPAPETVPFVPAANRKNATSDQIPTATTTKKSAQPAETTAEVEVATS
AAPKATVDDDGIVSVKKKKAKKPKKASPSPVTDGAPGSGDAKSEKKKPAKKQKVKAGDIP
TFSYENEANLLDEPAKAATNQRKAKKAKHDTKGDSKKKTGIDTSAFRRPAPDATAPKSGN
RSGTFM
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggcatctggcaacggatcgaagagcaagggaaagaaggcggcttcttcgagcaaaccg
tccagcaagccgtcctcccgtgcgcagtcggaggggtctccatcggccccgggtccggtg
ccgaacccctccactgactttgccgggtttgttgacaatatgaccaaggcgctagaggcc
agcacatcggctgcagctgggttcccggataagtctgatctagctttccatcgtacgctc
gataggaagtttgccaaggggctggacgccaccggtcaacgtgtgctcgaccttaccgat
aggctgttgcagctggctgttgagggatcgcaggagaagaccaaggctgccggaggaaaa
gtcaagccgagaagaaaggttacggacgaggatgacgtcgtggacagcttccaggcaacg
gtcatcgagttcatcgatgcactcttggaggacgctgtaggtagcggttgtaggacattg
ctgacactgaaggactcgaacctggacgaggtcaacggaaagaagcagaaggctgccatt
gatatcaagccgtctcttgccgccaaggctgggcagaagctacctggtcccttctcgcag
acgtctcaggccagactaccaacgcatcttttcaatgctccgggtatcgccaaacctcag
ctgttgtttcaggacggcgttgacaactcccccgatgctcgatggtcgcctacgcttcct
gtcaaggagcacgcgatggtgcctctcggccacacgatcagcgaggatgactcgtggcct
atgggcgaaatggacgacgacccgaagaaggtcgctgctcgtcgtgagaagattgccaag
ttcgagcaacacccgtactactacgaaacgcgtcaccttccatacccgacgtccatgttc
acgtcgtcgacgcctatcaggccgaagtcgtttgaggatacgcctttcgagttcatcgac
acccctgagcaactcgccgctctcactgagaccctgaagaaggctaaggagattgccgtg
gacctggagcatcacaatcaacgatcgtactatggcttcacctgtctgatgcagatcagc
acccgtgagggcgattggatcatcgacaccctggctctccgggctgaacttcgcgagcac
aagcttgggcatgtttttgcggacccgtccgtcgtcaaggtcttccacggtgccgactcc
gacatcgtttggctgcaggaggactttgacatctacattgtcaacctgttcgacacatat
catgcgaccaaggtcctagagttccccaagttttcgctcgctagcttgcttcagctctat
tgtgactttgaacctgacaagcgctaccagatggcggactggcgcatccgaccaattcca
gatgagatgatgaagtacgctcgttccgacacgcacttcttgctattcatctacgacaat
ctccgcaatgcgctgattgcccgcgcttcgcgtacgccttccccctccgtcgaaggacag
actccgaagcccaacccccaacgggccatgcgcaaggtcttggacctttcttcggaaacc
gcactgaagctgtaccaacgagacgggtatgaccccgtgaagggtcagggtatgaacgga
tgggcaaacctttccaagaagctcggcaagaaagacgtcatgaaggaggaggtgctcatt
cagctctcgcaccttcgtcccaacaacgcttccgtcttagcccgtactttggtgcatcag
tcggcagaagcgtatgcacgtgcggacgagatcgcggaggtcatcaagaatgccgctgca
gctttccgtgcgcggagcccctcgaaaagcccatcgaagagcctgactccgctttctggc
acgacctcgagagcgcaatccgtggtcactgctacgaagaagtccacgaaagcggctgga
ccggttatcgatgtgtgggcgggtattggaaccggtgccggtgcgccgtcttcgtccgcc
ttgttcggttcgaccttgacaaagaagaccgcaagcccgtcaaagaactcccagaaagcg
tcgtcctcgctgttcgggagcacgttatctactccaggaggtggccgttcctcgcgcaag
gcctcgcctggcttcaacgctgtgcagtcaagcatcttctccgcacttgcgcctgcggtg
gcggcaccaaaggtggaggtggaggcccctggatcgtccctccccgcgccagagacggta
ccgtttgtaccggcggctaatcggaaaaatgccacatccgatcagatacccacagccacc
accaccaagaagtccgctcagccagccgagactacagccgaggtggaggttgcgacctct
gcggcccccaaggccaccgttgacgacgacggcatcgtttctgtcaagaagaagaaggcg
aagaagcccaagaaggcgtcaccgtcgcccgtcacggacggtgcaccggggtctggtgat
gctaagtctgagaagaagaagccggcgaagaagcagaaggtcaaagcgggtgacatcccc
acgttcagctatgagaacgaggctaatctgctggatgagcctgcaaaggccgcaaccaac
caacgcaaggcaaagaaggcgaagcacgacactaagggtgattccaaaaagaagacgggc
attgatacgtcggcgttccgtcggcccgcgcccgatgcgacagcacccaagagtgggaac
cgctcgggaacgttcatgtag
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