Trichosporon asahii var. asahii: A1Q1_08196
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Entry
A1Q1_08196 CDS
T06566
Name
(RefSeq) hypothetical protein
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
tasa
Trichosporon asahii var. asahii
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tasa03021
]
A1Q1_08196
Enzymes [BR:
tasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
A1Q1_08196
5.6.2.5 RNA 5'-3' helicase
A1Q1_08196
Transcription machinery [BR:
tasa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
A1Q1_08196
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
Viral_helicase1
SAP
AAA_30
Pepsin-I3
Motif
Other DBs
NCBI-GeneID:
25991708
NCBI-ProteinID:
XP_014181818
UniProt:
J6F134
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MKLSFDFAFPLLTSAVRKRVATTQRSLQRPSLFPHVLGGGRPLRPRSSLEQAHRGQEEDA
AEADVPIRSPERVPVRDTGSPVSRERCSADGPSLRRPEAREGWIALVQEDFDDVEPADRL
RVWENFIVSAEKETLLQQQAAKLDRLSEFQSETLARLFLERVEAQTAHRCDGQCGTHYCV
GERHTELVAAAHDPSDEFAERTVSCAQYYGEGRCMSCTAQRYVEGEFARDLWAQAISDIQ
RRDSAKAAPGRSISLAESSTTTNEAMVDSILEWLAGGPPLSELDNTCLLDVKKVSAVRQK
YENLRNRRYAMRESLDLRRQVFLEDDGAPAAAAYHKLGEVEIVPTWYNLAKGGGHGRGID
VVIGSIYLTNQGHDGNALKPLLDAGQGLEVISLEEACEELYANPGPEHLLLRSKPEESRS
IVDLIDQYDPAPGEDDAVLELLEYSDTFVEEHNAGFPTVFWPEAEEEDVWRLAVRVLCRA
EEDCDYIFPPSDKNGPAGEHPLRPGDRLRPAPHGLRRPTLLAHTVHHAPFDLGFASAMPT
SLADYDEAKVSARVELRLENRLVRSWRLPVLVSMLRSAGGCRRRGGVRASGGAVAIQPRR
RRRERVPIQWSLGDRAFGALRRRARHLRRLPFGHGSAPQRAQGQVEWVTRPGLTLTLPGL
PEETTERLSTAYTVVGLRHLLMAKGAPSEGPKAELSRKLAEFQDGPDLDLVEPSSSLDFI
ELMETYPRRACSVGEARGASSSRERGLATSGRRSYRGCAEEHRGRFAKTRQQVHARLSLV
VFDEAGCATEPDPLGVLQLLAALFVLIGDHQQLPPLVTSRTAAGVGYQRSTFQRLIERGS
YLIFLNESAYHDRLLSADLQWLNPRKTAVRHRHWALGPVSFVMTQSHHEKVGLSVANKGV
ANVAVQLIVALDAIASAHDLPAPVSVQIISAYRGQLQCVKDKPSQRFLRGPEGWLVGSLV
VNVSTDDSFQGQEADVVVVSTTRHSTPTSSPGFLDDLARANVALSRARKSLVILGDPVIL
RRLPAWSTALHSAEGYGRLESPSQVQATSAVSRGAVAQQAMCWTRFGWQEGAFSGRNGWG
LMASSGYRSCPHLLTRSTRRVPISSHQPFTRSGSGSLSDALCQADKNSQAPDLGHGALSC
HSACLSCGSFVTLSLFVRNGADEGQRELRRYLEE
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgaagctctccttcgacttcgccttcccccttctgacttcggcggtccgcaaacgtgtt
gccactactcaacgcagtctacagcggccaagcctcttccctcacgtcctaggaggtggt
cgacccctcaggccgaggtcaagcttggaacaggctcatcgcggccaagaagaagacgct
gctgaagcggacgtcccgatccgatcgcctgagcgagttccagtccgagatactggctcg
cctgtttctcgagagcgttgcagcgcagacggcccatcgctgcgacggccagaagcacgg
gagggatggatcgcgcttgtacaggaagattttgacgacgttgagcctgccgaccggctc
agagtctgggagaacttcatcgtctcggccgagaaggaaactctgctccagcagcaggcg
gcgaaactcgatcgcctcagcgagttccaatccgagacgctggctaggctgttccttgag
cgcgtcgaggcgcagactgcccatcgttgcgacggccagtgcggcacgcactattgcgtc
ggcgagcgccacacagagctcgtggctgccgcgcacgacccgagcgatgagttcgcagag
cggacagtgtcctgcgcacagtactacggagagggaaggtgcatgagctgcacagctcag
cgctacgttgagggcgagttcgccagggacctctgggcccaggcgatcagcgacattcag
cgtcgcgacagcgccaaggccgcacctggccgctccatctcgctggctgagtcatctacg
acgacgaacgaggccatggttgacagcatactcgagtggctggctggcgggccaccattg
agcgagcttgacaacacgtgcctccttgatgtcaagaaggtctcggccgtccgccagaag
tacgagaacctccgcaaccgccgatacgcgatgcgcgagagccttgatctgcgtcgtcag
gtctttctcgaggacgacggcgcgcccgccgccgccgcttaccacaagcttggcgaagtc
gagatagtacctacttggtacaatctcgccaagggcggcgggcacggtcgcggcatagat
gttgtcatcggcagcatctacctgaccaaccaagggcacgacggcaatgccctcaagccg
ctcctggacgccggtcaaggcctcgaggtcatcagtctcgaggaggcttgcgaggagctc
tacgccaacccgggtcccgagcacctgctcctgcgcagcaagccggaggagagcaggtcg
atcgtcgacctcatcgaccagtacgatccggctccgggcgaggatgacgccgtgctcgag
ctgctggagtactcggacacgttcgtagaggagcacaacgccggcttcccgaccgtgttc
tggcccgaagccgaggaggaagacgtatggcggttggcggttagagtgttgtgccgagcg
gaggaagattgtgactacatcttcccgccgtcggataagaacgggccggccggcgagcat
cctctccggcctggagatcgacttcgtcccgccccgcatggtcttcggcgcccgacgctg
ctcgcgcacacggttcaccacgcgccgttcgacctgggctttgcctccgccatgccgacc
tccctggcagactacgacgaggccaaagtcagtgcgagggtagaacttcggctggagaac
cgcctggtgcggtcctggcgcctccccgtgctcgtcagcatgctgcgcagcgcaggaggt
tgtcgacggcgcggcggcgtgcgagcttccggtggagctgttgccattcagcctcgccga
cgacgtcgagagagagtaccgattcaatggtctctcggcgacagagctttcggtgcgctt
cgacgtcgagctcgacacctacgtcgccttcccttcggccatggttcagcgccgcaaaga
gcccaaggacaggtagagtgggtcactcgtcctggattgacgcttactctaccaggactg
cccgaggagacgacggagcggctgagcacggcgtacactgtcgttggtttgcgccacctg
ctcatggccaagggcgctccctccgaggggcccaaggctgagctcagtcgcaagctcgcc
gagtttcaggacggaccggatctcgacctcgtcgagccgtcatccagcctggatttcatc
gagctgatggaaacctacccgcgccgagcatgttccgtcggcgaggctcgaggagcgagt
tcttctcgcgagcgtgggctcgctacgtctggtcgacgctcgtatcgaggctgtgctgag
gagcaccgaggtcgttttgcgaagacacgccagcaagtgcatgctcggctctcgctcgtc
gtgtttgacgaagcgggctgcgctaccgagccggatcccctcggtgtcttgcaactcctc
gctgcgctgttcgtgctgatcggcgaccaccagcaacttccacccctcgtgacttcgcgc
actgccgccggcgtcggttaccagcgcagtactttccagcgtttgattgagcgtggaagc
tatctaatcttcctgaacgaaagcgcgtaccacgaccgccttctcagcgccgacttgcaa
tggcttaaccctcgcaagacggctgttcgccatcggcattgggcgctggggccggtctcc
ttcgtgatgactcagtcccaccatgagaaggttggattgtccgtcgcgaacaagggcgtg
gccaacgttgctgtgcagcttatcgttgctctcgacgcgatcgcctcggcgcacgacctg
ccagctccggtctcggtccagattatctccgcgtaccgcggccagctgcagtgcgtcaag
gacaagccgagccagcgattcctcaggggtccggaagggtggctggtcggctcgctcgtc
gtcaacgtgtcgacggacgattccttccagggccaggaagcggatgttgtggtcgtgtcg
acgacacgccactccacgccgacctcctcgccgggattcctggacgatctggcacgagcc
aacgtggcgctgtccagagcgcgtaagagcctggtgatccttggtgaccccgtcatcttg
cgcagactgccagcttggtccactgcgctgcactccgcagagggctacggtcgacttgag
tcaccatcgcaagtccaggccacgagcgcggtctcgcggggcgctgtcgcccaacaagca
atgtgttggactcgattcggctggcaggagggagcattctcgggcaggaatgggtggggg
ttaatggcaagcagtggctaccgatcctgtcctcacctcttgacacgcagcactcgtcgc
gtgccgatcagctcacatcagccgttcacccgttccggatctggttcactttccgacgcc
ttgtgccaggctgacaagaacagtcaagcacctgacctcggtcatggcgcgctgtcttgc
cactccgcgtgtctatcgtgtggttcgtttgtcaccctctctctcttcgtgcgaaacggc
gcagacgaaggtcagcgggaactgcgccgatacttggaggagtga
DBGET
integrated database retrieval system
