Trichosporon asahii var. asahii: A1Q1_08213
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Entry
A1Q1_08213 CDS
T06566
Name
(RefSeq) chromodomain helicase
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
tasa
Trichosporon asahii var. asahii
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tasa03021
]
A1Q1_08213
03036 Chromosome and associated proteins [BR:
tasa03036
]
A1Q1_08213
Transcription machinery [BR:
tasa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
A1Q1_08213
Chromosome and associated proteins [BR:
tasa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
A1Q1_08213
SLIK complex
A1Q1_08213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CHD1-like_C
Helicase_C
ResIII
HDA2-3
DEAD
ANAPC_CDC26
Chromo
Motif
Other DBs
NCBI-GeneID:
25991725
NCBI-ProteinID:
XP_014181835
UniProt:
J5TFE2
LinkDB
All DBs
Position
Unknown
AA seq
1324 aa
AA seq
DB search
MQSDSDEGSSPLPVSSHTTASSNTKAPRQIILNAPRAASDDDLTPEPSDNGIDDADGEEE
LDMDSREAQTTEVQGRKERFVELPFTLTSAPSHFPSKRPSSDSSDEDYATKSHKKKFFER
SGGNSRGTSTPDTAFDSDGASWRRGAARKVVTYNEASVDYGLDSEGDDDVMYYQQEARIV
AMRSTLRTKRTFLKRTSFKKVENYIQKVWQVEQAFHNPAPDAKWKPSREDLEQYEIERER
IRDLHESYKQVERVVGEKEEERDGQSVTLFLCKWTTYDEIKDQAQDAIQAYHERMARPTV
PAKTQFYPIHNRPTYQKIAEDPEYLKCGGALKPFQLTGLNWLAYLWCKGGHGGMLADEMG
LGKTVQSVSFLSYLFHTQKQYGPFLVVVPLSTINAWQMQFRTWAPDLNVIMYMGSAASRE
MIRQTEFGPLKNLKFNVLLTTYEFILKDRQELQQIKWQALEVDEAHRLKNSDSQLYEALQ
SFSTGFRLLITGTPLQNNVKGEWKIVITLTLELLSLLHFIEPEQFQLANDFELGDTEQEA
KIKALHSQLETLMLRRLKKDVVKELPTKSESILRVEMSGLQQHYYKNILTKNFAVLSKGG
TQSVSLMNVAMELKKAANHPYLFDGAEDRSKPVHEQVRGLVMNSGKMVLLDKLLQRLKAD
GHRVLIFSQMVRLLDIISDYMSARNYTHQRLDGTVPSDVRKKSIEHFNAPGSPDFAFLLS
TRAGGLGINLETADTVIIFDAMARAHRIGQTRHVNIYRFVTKGTIEEDILERAKRKMILE
YASDGGHINGTSTPKDKNGDFSKEELAAILKFGAKSMFQADENAQNQKLDAMDLDDILNK
ADNFDTEAAAAPGGTSSGGEAFLAQFAAIQDVKNDADDLSWDDIIPVEERVKLDEEESRA
LQEGEVGPRKRAAARAPGAYEGMDEADGEPAGSKAASPAEKKQKVAGPRKSNAQRAIELK
EAKLTSKNRVVVIQTCDDVLTQAEEAVTNHKNELRAMQERGETISSSLRQKAILFTFRGI
QGINAETVVARYYELKALVEHFKRVEDIENYAIPHDNLKPTMNWSVEWGPKDDSKLLIGI
WKYGFGAWEQIKNLHDKIFLEDPKVVKDPNAPKAGIPGPIHLVRRGDYLCGLVREYEENR
RMLIEQQAVIASMPVKEGFGYDHPPLPFSVSAKASSSSRGDKGKRRKTPEYTDSEDEESY
ESMDEDAVKELLRPAKRHLLKSGTDNLSREEKIAALKECVAGIGSRIEEIVAEKAAEGAD
SAKWRKHCWVFASFFWPRQGVNYSKLMDIHSKLDSSPVQKKPKTKRKGGDTDNIVKKRVK
TEAE
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtgattcggacgaagggagcagccctctgccggtgagtagccacaccacagct
agctctaacacgaaggccccccgccaaattattctgaatgctcccagagcagcgtcggat
gacgatcttactcctgagccctcagacaacggtatagatgatgcggatggagaggaggaa
ctggacatggacagccgcgaagcgcaaaccacagaagtccaaggccgcaaagaaaggttt
gtcgagctcccgtttacgctgacctcagctccgtcgcacttcccctccaagaggccctcc
tcagactcatctgatgaggattatgcgaccaagtcgcacaagaagaagttctttgagcgt
tcaggcggcaattcgcgcggaacatcgactccggacactgcctttgattctgatggtgcc
tcgtggcgacgaggtgccgcccgcaaggtcgtgacctacaacgaagcgagcgtcgattac
ggtcttgacagcgagggcgatgacgatgtcatgtactaccagcaagaggcacgcatcgtc
gcgatgaggagcacgctaaggacgaaaaggacattcctcaaacgaacctcattcaagaag
gttgagaattacatccagaaggtgtggcaggtcgagcaggctttccacaaccctgccccc
gacgccaaatggaagccttcgcgtgaagatttggagcaatacgaaattgagagagaacgt
atccgagaccttcatgagagctacaagcaggtcgagcgcgttgttggcgaaaaggaggaa
gagcgagatggccagtctgtgactttgttcctctgcaaatggaccacgtacgacgagatc
aaggaccaagcgcaagacgccatccaggcttaccatgagaggatggcgcgaccgacggtt
ccggcgaaaactcagttctacccgatccacaatcgtccgacatatcagaagattgccgag
gacccagagtatctcaagtgtggtggcgctctgaagccattccagctcactggtctcaac
tggctcgcgtatctttggtgcaaaggtggtcacggaggtatgctggcggatgaaatggga
cttggcaaaactgttcagtcagtcagcttcctttcgtatctgttccacacgcagaagcaa
tacggcccgttcctcgtcgttgttcctctgtcaaccatcaacgcctggcaaatgcagttc
cgcacttgggcaccggacctcaacgtcatcatgtacatgggctcagctgcctcgcgtgag
atgatccgccagaccgagtttggccccttgaagaacctcaagttcaatgttctcctcact
acctacgagtttatcctcaaggaccgccaagaactccagcagatcaagtggcaagccctc
gaagtcgatgaggcccatcgtttgaagaatagcgactcccagttgtatgaagcgctgcag
agcttctccaccggcttccgcctcctcatcaccggtacaccgctgcagaataacgtcaag
ggtgagtggaaaattgtcattacgctgactttagaactgctcagccttcttcactttatt
gaacccgagcaattccagttggccaacgactttgagctgggcgataccgagcaggaggcc
aagatcaaggctcttcactcgcagttggagacgttgatgcttcgtcgtctcaagaaggac
gttgtgaaggagcttcccaccaagtcggaatccattttgcgagtggagatgtctggtctg
caacagcactattacaagaacatcctcacgaagaatttcgccgttcttagcaagggtggt
acgcagagtgtgtccctcatgaacgtcgctatggaactcaagaaagcggccaaccatccc
tatctgttcgacggcgccgaggaccgcagcaagccggtgcatgaacaggtccgtggactg
gtcatgaacagcgggaaaatggtcttgctcgacaagcttttgcaaaggctcaaggcggac
ggccaccgcgtccttatcttcagccaaatggttcgtttgttggacatcatctcggattac
atgtctgccaggaattacacccatcaacgcctcgatggtacggttcccagcgatgtgcga
aagaagagtattgagcatttcaatgcgcctggatcacccgactttgcctttcttctgtcg
acccgagctggaggtctcggcatcaacctcgagacagcagacactgtcatcattttcgac
gccatggctcgtgcgcatcgaatcggtcaaaccaggcatgtcaacatttaccgtttcgta
acgaagggcacaattgaagaggacatcctggagcgtgcgaagcgcaagatgattttggag
tatgccagtgacggtggccacatcaacggaacgtcgacccctaaagacaagaacggggat
ttctcaaaagaggagctggcggctatcctcaagtttggtgccaagtccatgttccaggcg
gacgagaatgcccaaaaccaaaagctcgatgccatggacttggacgacattctcaacaag
gccgacaacttcgacacagaagctgctgctgcgcctggaggaacttcttccggaggcgag
gctttcctggcccaatttgcggctattcaggatgtcaagaatgacgccgacgatctgagt
tgggacgatatcattcccgtcgaagaacgtgtcaagcttgacgaggaggagagccgcgcc
ttgcaggaaggagaagtgggcccccgcaagcgagcggctgctcgcgctccgggagcttac
gagggcatggacgaggccgacggtgaaccggctgggagcaaggctgcttctcccgccgag
aagaagcaaaaggtcgccggaccccgcaagagcaacgcgcaacgagcaatcgagcttaaa
gaggccaagctcacatccaagaaccgtgtcgtcgtcatccaaacgtgcgacgacgttctc
acccaggcagaggaagctgtcaccaaccacaaaaatgagctgcgcgcgatgcaggagcgc
ggcgaaactatatcttcgtctttgcgacagaaagccattctcttcacattccgtggtatc
cagggcatcaacgccgagacggtagtcgctcgctactatgagttgaaggctctagtagag
cacttcaagcgcgtggaggacatcgagaactatgccatccctcacgacaacctcaaaccc
accatgaactggtcggtggaatgggggccgaaggacgactccaaattgcttatcggcatc
tggaagtatggctttggtgcttgggaacagatcaagaatctgcacgacaagatcttcctc
gaggaccccaaggttgtcaaggaccccaatgcgcctaaagctggaattccgggtccgatc
cacctcgtccgccgtggcgactacctgtgtggacttgttcgcgaatatgaagagaaccgg
cgcatgctgatcgagcaacaagcggtcattgcaagcatgcctgtcaaggagggctttggt
tacgaccatcccccattgcccttcagtgtaagcgccaaagctagtagtagctctcgagga
gataagggcaagaggcggaagacgcccgagtataccgattcggaggatgaagaaagttac
gagtcgatggacgaggatgctgtcaaggagttgctgcgaccagcgaagcgacacctcctc
aagtctggtaccgacaacctcagtcgtgaggagaagattgcagccctcaaggaatgcgtc
gctggcatcggatcacgcatcgaagagattgtcgcggagaaggctgctgaaggggcggat
tctgccaaatggaggaagcactgttgggtgtttgcttcgtttttctggccccggcaaggt
gtgaactactctaagctcatggacatccactcgaaactggattcaagccccgtgcagaag
aagccgaagacaaagcgtaagggaggagacaccgacaacattgtaaagaagcgcgtcaag
acggaggctgagtag
DBGET
integrated database retrieval system
