Trichosporon asahii var. asahii: A1Q1_08270
Help
Entry
A1Q1_08270 CDS
T06566
Name
(RefSeq) polyadenylate-binding protein
KO
K13126
polyadenylate-binding protein
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03015
mRNA surveillance pathway
tasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
A1Q1_08270
09123 Folding, sorting and degradation
03018 RNA degradation
A1Q1_08270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasa03019
]
A1Q1_08270
03041 Spliceosome [BR:
tasa03041
]
A1Q1_08270
Messenger RNA biogenesis [BR:
tasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
A1Q1_08270
mRNA cycle factors
Stress granule specific factors
A1Q1_08270
Spliceosome [BR:
tasa03041
]
Complex C
Other components
Complex C specific factors
A1Q1_08270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_RdRP1_2
RBD_DEAH11
RRM_occluded
YflT
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
25991782
NCBI-ProteinID:
XP_014181892
UniProt:
J5R3Y8
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MSADATPAATPAAAAPSSPTPAAASPAPATPAAEGAAKPAQPAPTSTTGQQQPGNSASLY
VGELDPSVTEAMLFEIFNMVGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEHLNY
SLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDDKIDNKALHDTFAAFGNILSCKVATDE
NGNSRGFAFVHYETGEAADAAIKSVNGMLLNDKKVYVGHHISKKERQSKVEEQRAKFTNI
FIKNLEPEFTQKDLEDMFKPFGEIVSAALSVGEDGLSKGFAFVNYTTHDAAKKAVDELND
KEINGKKLYVGRAQKRAERDEELRRMHEERRLENESKTAGVNLYVKNIDDEWDDDRLRSE
FDFAGTITSAKVMRDDKGASRGFGFVCFSQPDEATRAVQEMNGKMIGTKPLYVSLAQKKE
VRRQALESQMQQRNAQRLQYAAANGLGGPQGYMQAPMYYPPMGPYGGPMMPVRGGVVGYP
GAPPMMGARPGRYPPSGQPGAPVPMGYMPPGGAGGNYPGMPNYPVRPAGNARPPTAARPN
GSPSGAQQGLPRGQVPARPQGDGAQAAAGQPRLTAQALARASPGEQRQMLGEAIYPLIHE
SQPELAGKITGMLLEMDNAELLHLVESPAALTEKVDEALRVLEDWGKNDEEKPAAAEGEK
KDEAAAAEKPAAEEEKKDEAAAEKKE
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgacgctacccctgctgccacccccgccgccgcggccccttcgtcgcccacc
cccgcggcggcgtcccctgcccctgccacccccgccgccgagggtgccgctaagcctgct
cagcctgcccctacctctaccactggccagcagcagcccggcaacagcgcctcgctctac
gtcggcgagctcgacccttcggtcaccgaggccatgctcttcgagatcttcaacatggtc
ggccccgtcgcctccatccgtgtctgccgtgacgccgtgacccgccgctcgctcggttac
gcctacgtcaactacctcaacgcggcggacggcgagcgcgcccttgagcacctcaactac
tccctgatcaagaaccgtccctgccgcatcatgtggtcgcagcgcgaccccgctctccgc
aagaccggccagggcaacatcttcatcaagaaccttgacgacaagatcgacaacaaggct
ctccacgacacctttgccgccttcggcaacatcctctcgtgcaaggttgccactgacgag
aacggcaactcgcgcggtttcgccttcgtccactacgagactggtgaggctgctgacgcc
gccatcaagtcggtcaacggcatgctcctgaacgacaagaaggtctacgtcggccaccac
atctcgaagaaggagcgccagtccaaggtcgaggagcagcgcgccaagttcaccaacatc
ttcatcaagaacctcgagcccgagttcacccagaaggaccttgaggacatgttcaagccc
ttcggcgagattgtttctgctgctctttcggtgggtgaggatggcctctctaagggcttc
gccttcgtcaactacaccacccacgacgcggccaagaaggctgtcgacgagctcaacgac
aaggagatcaacggcaagaagctctacgtcggccgtgcccagaagcgtgccgagcgtgac
gaggagctccgccgcatgcacgaggagcgccgcctcgagaacgagtccaagactgccggt
gtcaacctctacgtcaagaacattgacgacgagtgggatgacgaccgtctccgttccgag
tttgactttgccggtaccatcacctcggccaaggtcatgcgcgacgacaagggtgcttcg
cgtggcttcggcttcgtctgcttctcgcagcccgacgaggccacccgtgccgtccaggag
atgaacggcaagatgatcggcaccaagcctctgtacgtttcgcttgcccagaagaaggag
gtccgtcgccaggccctcgagtcgcagatgcagcagcgcaacgcccagcgtctccagtac
gccgctgctaacggactcggtggaccccagggctacatgcaggcccccatgtactaccct
cccatgggcccctacggtggccccatgatgcccgtccgtggcggtgtcgtcggctacccc
ggcgctccccccatgatgggtgcccgccccggccgctaccctccctctggccagcccggt
gcccccgtccccatgggctacatgcctcccggaggtgccggcggcaactaccccggcatg
cccaactaccccgtccgccccgctggcaacgcccgtccccctaccgctgcccgccccaac
ggctcgccctctggtgcccagcagggtctcccccgtggccaggtccccgcccgtccccag
ggtgacggtgcccaggccgccgccggccagccccgcctcactgcccaggctctcgctcgc
gcttcgcctggcgagcagaggcagatgctcggtgaggccatctaccccctgatccacgag
tcccagcccgagctcgccggcaagatcaccggcatgctcctcgagatggacaacgccgag
ctcctccacctcgtcgagtcccccgccgctctgaccgagaaggtcgacgaggccctccgc
gtcctcgaggactggggcaagaacgacgaggagaagcccgccgctgccgagggtgagaag
aaggacgaggctgctgccgctgagaagcccgccgccgaggaggagaagaaggacgaggcc
gccgccgagaagaaggagtaa
DBGET
integrated database retrieval system
