Trichoderma asperellum: 36613568
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Entry
36613568 CDS
T10296
Symbol
TrAFT101_005916
Name
(RefSeq) uncharacterized protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
tasp Trichoderma asperellum
Pathway
tasp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
36613568 (TrAFT101_005916)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tasp03041
]
36613568 (TrAFT101_005916)
Spliceosome [BR:
tasp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
36613568 (TrAFT101_005916)
Complex C
U5 SnRNP specific factors
36613568 (TrAFT101_005916)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
DUF6716
Motif
Other DBs
NCBI-GeneID:
36613568
NCBI-ProteinID:
XP_024760427
LinkDB
All DBs
Position
3:join(4017229..4017248,4017314..4017450,4017519..4019659,4019740..4019827,4019905..4020470)
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AA seq
983 aa
AA seq
DB search
MDDLYDEFGNFIGEEVESEEVSEAGDEAADYAYDDEQEEAPSVTGQELMELDDGPSNAVI
LHEDKQYYPTAEQVYGAEVETRVEEVDAQPLTQPIIAPVEQKKFNIEEVDLPPVFFDREF
MADLMNFPEQTRNIALAGHLHHGKTAFMDMLVLETHDITDRLDRRVGKKRDEALRYTDVH
MLERERGISIKAAPMSLVLQSTKGKSHLFHIVDTPGHVNFVDEVAAAFRLVDGVCLVVDV
VEGVQINTEQIIKHAVLEDIPLTLIINKMDRLILELKLPPKDAYFKLKHVVEEVNTVIAN
TVPTKAASKRLSPEKGNVLFACTDMGWCFTLPSFAKMYTDTFGDINTDEFARRLWGDAYY
NPKKRNFTRKPAEDRSARSFVHFILEPIYKIFTHAISDSPEQLKLVLSSLGIELKPSQYK
ADANVILKLVCEQFFGPSTGFVDMVVKHIPSPAEGAQRLLERYYTGPLDTKVATSMQACN
QDGPLVIHVSKLFNTSDAKSFYSFGRVLSGTARPGATVRVLGEGYSLDDEEDMTTASIGE
VFIAETRYNIPTDGVPAGNLVLLGGIDNSIVKTATVVPPKLEDDEDAFIFKPIAHFTESV
LKVAVEPINPSELPKMLDGLRKIQKSYPLINTKVEESGEHVVLGTGELYMDCVLHDLRKL
YADMDIKVSDPVTRFCETVVETSATKCYAITPNKKNKITMVAEQLEKGISTDIETGAVRI
RDPIRKTAKFFEENHGWDKLAARSIWAFGPDEMGPNILQDDTLPTEVDKKLLSTVKESIR
QGFSWATREGPLCEEPIRNTKFKVTDVVLANEAIFRGGGQIIPTSRRACYSSFLMASPRL
MEPVYTVSVTGPEDSYMEVYNVLARRRGHVLSDGPVAGTPLYRVNGLIPVIDSFGFETDL
RIKTQGGSMVSLVFDSWSIIPGDPLDRDQVTRPLQPAAAQATARDFVLKTRRRKGLSEDV
SVKTFLEPEFYQSLMESGMLGDV
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctctatgatgagttcggaaacttcatcggcgaagaggttgaatccgaagaa
gtgtccgaggctggagatgaggcggctgattatgcatatgatgatgagcaagaggaggca
cctagtgtgactgggcaagagcttatggagcttgatgatggaccttcgaatgccgtcatc
cttcatgaagacaagcaatactaccccactgccgagcaggtgtatggtgcggaagtcgag
acgcgcgtggaagaggtggatgcacagcctttaacacagcctatcattgcgccggtcgag
cagaagaagttcaacatcgaagaggtcgacttaccgcccgtgtttttcgaccgcgagttc
atggccgatctgatgaactttcccgagcaaacaaggaacattgcgcttgctggccaccta
catcacggaaaaacggccttcatggacatgcttgtcctagagacgcatgacattaccgac
aggcttgatcggagagtcggcaagaagcgtgacgaggcgctgcgatacaccgatgtacac
atgttggagagggagcgaggaatctctatcaaggctgcgccaatgagccttgttctgcag
agcaccaagggaaaatcacatctttttcacatcgttgatacccctggccatgtcaacttc
gtagatgaagtggcagcagcatttaggctggtggatggtgtgtgtctggttgtcgatgtg
gttgagggtgtccaaataaatacagagcaaatcatcaagcatgctgtgctagaggatatt
cccttgacactcatcatcaacaagatggatcgtctgatcttggagttgaagctcccacct
aaggatgcctacttcaagcttaagcatgttgttgaggaggtcaacacagtcattgccaac
accgtcccgaccaaggcggcttcaaagcgactaagccccgagaaaggcaacgttctattc
gcctgcacggatatgggatggtgtttcacgctgccttcttttgccaagatgtacacggac
acctttggtgacatcaacacggacgagtttgccaggcgattgtggggagacgcctattat
aacccgaagaagcggaattttactcgcaagccggcggaagacagatcagcaagatcattt
gttcatttcattctcgaacctatctacaaaatctttacacatgctattagtgatagcccg
gaacagttgaaattggtcctatcttcgcttggcattgaactgaagccgtcacagtacaaa
gctgatgcgaatgtcatcttgaagttggtatgcgagcaattctttggtccctcaacgggc
tttgtcgatatggttgtgaagcacattccttctccagctgaaggagcacagcggctactg
gagcgctactacactggacctttggatacaaaggtagcgacttcgatgcaggcatgcaac
caggatgggcccctggtgattcatgtctcaaagctcttcaatacctctgatgcaaagagc
ttctactctttcggtcgtgttctcagcggtactgcccggccaggcgccactgtgagagtc
cttggtgaaggctattcccttgatgacgaggaagacatgacgacagcctccatcggcgaa
gtattcatcgcagagacaagatacaacatccctacggacggtgtcccggcgggtaacttg
gtgctgttaggaggcatcgacaactccatcgttaaaactgcgacagtcgtaccccccaag
ctggaagatgacgaggatgccttcatcttcaagcccatcgcccattttacggaatccgtg
ctgaaagtggctgtcgagcctattaacccctccgagcttccgaagatgcttgacggacta
cgcaaaatccaaaagtcatatcccctaatcaacactaaagttgaagaatctggtgaacac
gtcgtcttgggaaccggagagctctatatggactgcgtactgcacgatttgcggaagctg
tatgccgatatggatatcaaggtatcagatccggtaacaagattctgtgaaacggtggta
gaaacttcagcgacgaagtgttacgccatcactccgaacaagaagaacaaaattaccatg
gtagcagagcagctggagaagggtatctctactgatatcgagaccggtgcagtgagaata
cgtgatccgatacggaagacggccaaatttttcgaagaaaaccacggctgggataagttg
gcggcaagaagtatctgggcttttggccctgatgagatggggccaaacattcttcaggac
gatactttgcctaccgaagtcgacaagaaacttttgtctacagtcaaagaatccataagg
caaggcttcagctgggctactcgtgaaggtcccctctgtgaagaacccatccgcaatacc
aagttcaaagttacggatgtggtattagccaacgaggccatcttccgcggtggtggtcag
atcatccccacttcccgaagagcgtgctactcatccttcctgatggcctctccgcgcctc
atggagcctgtttacaccgtctctgttactggcccagaagactcttacatggaagtttat
aacgtgcttgcacggcgccgaggccacgtcctatctgatggccccgttgctggcacacct
ctctatcgtgtaaatggcctcattcctgtcattgacagttttggcttcgaaacagatttg
cgaatcaaaacacagggtggttctatggtcagcttggtgttcgatagctggagcatcata
cccggtgatccgcttgatagggaccaggttacgaggccgctccaacccgccgccgcgcag
gctacagccagagactttgtgctgaagaccagacggcgaaaaggtctaagcgaagatgtc
agtgtcaagacattcttggaaccggaattctaccagagcctgatggagagtggaatgctc
ggcgacgtataa
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