Trichoderma asperellum: 36616230
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Entry
36616230 CDS
T10296
Symbol
TrAFT101_008918
Name
(RefSeq) uncharacterized protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
tasp Trichoderma asperellum
Pathway
tasp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
36616230 (TrAFT101_008918)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasp03019
]
36616230 (TrAFT101_008918)
Messenger RNA biogenesis [BR:
tasp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
36616230 (TrAFT101_008918)
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GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_15
AAA_23
AAA
DUF3584
AAA_28
AAA_22
SRP54
AAA_16
AAA_25
PduV-EutP
AAA_14
ORC-CDC6-like
RsgA_GTPase
nSTAND3
NACHT
AAA_13
Motif
Other DBs
NCBI-GeneID:
36616230
NCBI-ProteinID:
XP_024761656
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Position
5:2290714..2291580
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AA seq
288 aa
AA seq
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MPTQQQNPPQIVTRSLSYTFPDFSTGVQDISLDLPPRSRTLLIGANGAGKTTLLRLLAGK
RLAPGDAISICGVDPFKEGLEGVTYLGLEWVLNPIVRNDIGVVELLRSVGGDAYPERRDE
LVDMLDIDINWRMHAVSDGERRRVQLAMGLLRPWTVLFLDEITVDLDVLTRYEFLAWLKR
ETENRECTIVYATHILDNLAGWPTHLVHMHLGTVKEWDTAENMLQAVDSTVGPTGNSRLG
ELVMGWLRDDLKERGPRSQVNRAPEGKTYGFGAIKIGGYGDESKQREN
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgccgactcagcagcagaatccacctcaaatcgtgacccggagtctttcctacaccttt
ccggacttttccacaggcgtacaggacatctctcttgatctgcctccacgctcacgaact
cttctgattggtgccaacggtgccggcaagacgacccttttgcgtcttctggctggaaag
cgcctggccccgggagatgccatttccatctgtggcgtcgatcccttcaaagagggcctc
gaaggcgtcacatacctcggtctcgagtgggtgctaaaccccatcgtacgcaacgatatt
ggcgtcgtagagttgcttcgatctgttggcggtgatgcttaccctgagcgccgtgacgag
ctggtcgacatgcttgatatcgacatcaactggcggatgcatgccgtatccgacggtgag
cgtcgcagagtccagctggctatgggtcttctgcgtccctggaccgtgctcttcttggat
gagatcactgtcgaccttgatgttttgactcgctatgagttccttgcctggctgaagcgg
gagacggagaaccgggagtgcaccatcgtttatgccacccacatcttggataacttggct
ggctggcctacccacctcgtccacatgcatctcggcactgtcaaggagtgggacactgct
gaaaacatgctgcaggccgttgattcgactgttgggcccactggcaacagccgtctcgga
gagttggtcatgggttggttgagggacgacctgaaggagagagggccgagaagccaggta
aaccgagctcctgaaggcaaaacttatggttttggtgctatcaagattggaggatatggc
gatgagtccaagcaaagggagaactaa
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