KEGG   Trichoderma asperellum: 36616230
Entry
36616230          CDS       T10296                                 
Symbol
TrAFT101_008918
Name
(RefSeq) uncharacterized protein
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
tasp  Trichoderma asperellum
Pathway
tasp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tasp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    36616230 (TrAFT101_008918)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tasp03019]
    36616230 (TrAFT101_008918)
Messenger RNA biogenesis [BR:tasp03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     36616230 (TrAFT101_008918)
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_29 AAA_15 AAA_23 AAA DUF3584 AAA_28 AAA_22 SRP54 AAA_16 AAA_25 PduV-EutP AAA_14 ORC-CDC6-like RsgA_GTPase nSTAND3 NACHT AAA_13
Other DBs
NCBI-GeneID: 36616230
NCBI-ProteinID: XP_024761656
LinkDB
Position
5:2290714..2291580
AA seq 288 aa
MPTQQQNPPQIVTRSLSYTFPDFSTGVQDISLDLPPRSRTLLIGANGAGKTTLLRLLAGK
RLAPGDAISICGVDPFKEGLEGVTYLGLEWVLNPIVRNDIGVVELLRSVGGDAYPERRDE
LVDMLDIDINWRMHAVSDGERRRVQLAMGLLRPWTVLFLDEITVDLDVLTRYEFLAWLKR
ETENRECTIVYATHILDNLAGWPTHLVHMHLGTVKEWDTAENMLQAVDSTVGPTGNSRLG
ELVMGWLRDDLKERGPRSQVNRAPEGKTYGFGAIKIGGYGDESKQREN
NT seq 867 nt   +upstreamnt  +downstreamnt
atgccgactcagcagcagaatccacctcaaatcgtgacccggagtctttcctacaccttt
ccggacttttccacaggcgtacaggacatctctcttgatctgcctccacgctcacgaact
cttctgattggtgccaacggtgccggcaagacgacccttttgcgtcttctggctggaaag
cgcctggccccgggagatgccatttccatctgtggcgtcgatcccttcaaagagggcctc
gaaggcgtcacatacctcggtctcgagtgggtgctaaaccccatcgtacgcaacgatatt
ggcgtcgtagagttgcttcgatctgttggcggtgatgcttaccctgagcgccgtgacgag
ctggtcgacatgcttgatatcgacatcaactggcggatgcatgccgtatccgacggtgag
cgtcgcagagtccagctggctatgggtcttctgcgtccctggaccgtgctcttcttggat
gagatcactgtcgaccttgatgttttgactcgctatgagttccttgcctggctgaagcgg
gagacggagaaccgggagtgcaccatcgtttatgccacccacatcttggataacttggct
ggctggcctacccacctcgtccacatgcatctcggcactgtcaaggagtgggacactgct
gaaaacatgctgcaggccgttgattcgactgttgggcccactggcaacagccgtctcgga
gagttggtcatgggttggttgagggacgacctgaaggagagagggccgagaagccaggta
aaccgagctcctgaaggcaaaacttatggttttggtgctatcaagattggaggatatggc
gatgagtccaagcaaagggagaactaa

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