Tatumella sp. TA1: EFZ10_03965
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Entry
EFZ10_03965 CDS
T09934
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
tatu
Tatumella sp. TA1
Pathway
tatu01501
beta-Lactam resistance
tatu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tatu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EFZ10_03965
01503 Cationic antimicrobial peptide (CAMP) resistance
EFZ10_03965
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tatu02000
]
EFZ10_03965
01504 Antimicrobial resistance genes [BR:
tatu01504
]
EFZ10_03965
Transporters [BR:
tatu02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
EFZ10_03965
Antimicrobial resistance genes [BR:
tatu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EFZ10_03965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QGX90870
LinkDB
All DBs
Position
complement(811696..814815)
Genome browser
AA seq
1039 aa
AA seq
DB search
MAKFFIDRPIFAWVLAIVIMMVGALSIMKLPIEQYPEVAPPAVQIRAAYPGADAKTLQDS
VTQVIEQNMNGLDGLLYMSSNSDSSGNLQLTLTFASGTDADIAQVQVQNKLQLAMPLLPQ
EVQQQGINVQKSSSSFLMVAGFVSEDGSMDMNDLADYISSNIKDPISRTTGVGDTQLFGA
QYAMRIWMDPAKLVNYNLTPGDIITAIKAQNSQVSAGQLGGAPAVADQQLNSSIIAQTRL
TSPEEFGKILLKTNTDGSTVRLRDVATIKLGGENYEVVARFNGHAASGLGIKLATGANAL
DTANAVKARLKEMEPFFPHGMKLVYPYDTTPFVKISIFEVVKTLFEAIILVFLVMYLFLQ
SFRATLIPTIAVPVVLLGTFGIISAFGYSINTLTMFGLVLAIGLLVDDAIVVVENVERVM
EEEGLDPKEATKRSMEQIQGALVGIALVLSAVFIPMAFFGGSTGVIYRQFSITIVSAMVL
SVLVAMILTPALCATLLKKHGSNDHKEKGFFGWFNRMFDKSTNHYVNSVSHIIRRTGRYL
IIYVVIFAGMVWLFMKLPTSFLPEEDQGLLVVQAQLPAGATQQRTEKVLDQVTDYFLTNE
KDTVKSVFTVNGFGFAGRGQNTGIAFLSLKPWEERTAAADKVDAIAGRAMVALGKIKDAI
VIPFNLPAIIELGNATGFDFELVDNANLGHDKLMQARNQLLGMAAQHPDVLVGMRPNGLE
DTPQYKLIVDQEKARALGVSISDINTTLSASWGGNYVNDFIDRGRVKKVYVMGEADSRML
PSDINKWYVRNSDGEMVPFSAFTSAKWQYGSPRLERYNGLPSLEILGQAAPGKSSGEAMG
LMEQLAGKLPQGIGYQWTGMSYQERMSGNQAPALYAISLIVVFLCLAALYESWSIPFAVM
LVVPLGVIGALAFTTLRGMSNDVYFVVGLLTTVGISAKNAILIVEFAVDLMKEGKGLMEA
TLDAVRMRLRPILMTSMAFMLGVLPLAISSGAGSGAQNAVGTGVLGGMMTATCLAIFLVP
VFFVVVRRRFSGQKKTHKE
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttctttatagatcgccccatttttgcttgggtactcgccatcgtaattatg
atggtcggggcgctatcgatcatgaaactcccgatcgagcagtatcccgaagttgcacct
ccagcggtacaaattcgtgcggcctatccaggtgcagatgcgaaaacactacaagattct
gttactcaggttatcgagcagaatatgaacggcttagacggactgctatacatgtcctct
aacagtgactcttcaggcaacttacagctaacgctgacctttgcctcagggaccgatgcc
gatattgcgcaagttcaagttcaaaacaaactgcaactggcgatgcctttgctgccgcag
gaagttcaacaacaggggattaacgttcaaaaatcctcaagtagcttcttgatggtcgcg
ggttttgtcagcgaagacggcagtatggacatgaacgaccttgctgactacatctcctct
aatattaaagatccgattagccggacgacgggtgtcggtgacacgcaactgttcggtgcg
cagtatgcgatgcgtatctggatggaccccgcgaagctggtgaattacaacctgactccg
ggcgatatcattacggcgatcaaagcgcaaaactcccaagtttcagcgggtcagttaggc
ggtgctccagcggtcgcggatcaacagttaaactcttcgatcattgcacagactcgtctg
acaagtccggaagaatttggcaagatcttgcttaaaacgaacactgatggctctaccgtg
cgactccgtgatgtcgccactattaagttaggcggcgagaactacgaggtcgtggcacgc
tttaatggccacgccgcttcggggttagggattaagctcgccacgggtgccaatgcactg
gataccgccaatgcggtgaaagcgcgtctaaaagagatggagcccttcttcccacatggg
atgaaactggtctatccttatgacaccactccgttcgttaagatctctatctttgaagtg
gtaaaaacgctctttgaagccatcatcttggttttcttagtgatgtatctgttcctgcaa
agcttccgcgcaacactgataccgactatcgcggttccggtggtgttactgggaaccttt
ggaataatcagtgccttcggttactcaataaacaccctcaccatgttcggccttgtactc
gccatcggtctattagtcgatgatgcgattgtcgtggtcgaaaacgttgaacgggtgatg
gaggaggaaggactcgatccgaaagaagccactaaacgctcgatggagcaaattcagggt
gcgttagtcggtattgcgctagttctttctgcagtatttattccaatggccttcttcggt
ggctcgactggggttatctaccgccagttctcaatcactattgtctcggcgatggtactg
tcggtgctggtcgcgatgatactgacgccggcgctttgtgcaacgttacttaaaaaacat
ggtagcaacgaccataaagagaaaggtttctttggctggttcaaccggatgttcgataag
agtactaatcactatgtaaacagtgttagtcatatcattcgtcgtactggtcgttacttg
attatctacgttgtgatcttcgcaggcatggtttggctgttcatgaagcttcccacctct
ttcctaccggaagaggatcaggggctacttgtcgtccaagcacagctaccggcgggggca
acgcaacagcgtacggaaaaagtcctagaccaagttaccgattacttcctaactaacgag
aaagataccgtaaaatccgtctttaccgtcaatggcttcggctttgcgggacgcggacag
aatacgggtattgcattcttaagcctcaagccttgggaagagcgtacggctgcagcggat
aaggtcgatgcgattgcaggtcgggccatggtcgctctgggcaagattaaagatgcgatt
gttatcccgtttaacctcccagcgattatcgagcttgggaacgcaactggcttcgacttc
gagctggtcgataatgctaacttaggtcacgataagttgatgcaagctcggaaccagtta
ctgggaatggcggctcaacatcctgacgtattagtcggtatgcgtcctaatggcttagaa
gatacgccacagtataagttgatcgttgaccaagagaaggcccgtgcactcggtgtgtct
atctccgatatcaacaccacactcagcgcaagctggggcggtaactacgtcaacgacttt
attgaccgtggacgggttaagaaagtatacgtgatgggcgaagctgattctcgtatgctg
cctagcgatatcaacaagtggtatgtgcgcaatagcgatggtgaaatggtgccgttctcg
gcctttaccagtgcgaaatggcaatacggttcaccacgattagaacgttacaatggactg
ccgtccttagaaatactcggtcaggcggcgccaggaaaaagttccggtgaagcaatgggc
ttgatggaacaattggccggcaagcttccacagggtatcggttatcaatggacggggatg
tcttatcaagaacgcatgtccggtaaccaggcaccggcgctttatgcgatctccctgatc
gtcgtcttcctgtgtttagctgctttgtacgagagctggtcgattccttttgccgttatg
ctcgtcgtaccactgggggtcattggtgcactcgccttcacgacattacgagggatgagt
aatgacgtttactttgtggtcggattactcacgaccgtcgggatctccgcaaaaaatgcc
atcctaatcgtcgagttcgccgttgatctgatgaaggaaggtaaagggttaatggaggct
acgttggatgcagtacgcatgcgcttgcgtccaatccttatgacctccatggcctttatg
ctgggtgtcctacccttagccattagctcaggtgcgggctcaggcgcacagaatgctgtg
ggtactggggtactcggtgggatgatgaccgcgacttgcttggctatcttccttgtccct
gtattcttcgtcgttgttcgccgacgtttcagtggacagaagaaaacacataaagagtaa
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