Tatumella sp. TA1: EFZ10_03970
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Entry
EFZ10_03970 CDS
T09934
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tatu
Tatumella sp. TA1
Pathway
tatu01501
beta-Lactam resistance
tatu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tatu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EFZ10_03970
01503 Cationic antimicrobial peptide (CAMP) resistance
EFZ10_03970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tatu03036
]
EFZ10_03970
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tatu02000
]
EFZ10_03970
01504 Antimicrobial resistance genes [BR:
tatu01504
]
EFZ10_03970
Chromosome and associated proteins [BR:
tatu03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EFZ10_03970
Transporters [BR:
tatu02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EFZ10_03970
Antimicrobial resistance genes [BR:
tatu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EFZ10_03970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CusB_dom_1
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
QGX90871
LinkDB
All DBs
Position
complement(814843..816021)
Genome browser
AA seq
392 aa
AA seq
DB search
MKMNRGLTPLAAILMFSGAVALSGCDDKSQQPAQKSAPEVGVVTLKAAPVNMTTELPGRT
SAYRVAEVRPQVSGIILKRNFIEGTDIKAGESLYQIDPAPYQAAYNSAVGDLAKAQANAR
IAQVTLQRYKPLLGTKYISQQDYDTASATLAQNNAAVRSAQAAVENARINLAYTKVSSPI
SGRIGKTAVTEGALVQNGQTNALATVQQLDPLYVDLTQSSDDFMRLRNQLNSGELKQGAG
KAPVTIVLNDGTTLKQKGTLEFSDVTVDQTTGSITLRAIVPNPDHSLLPGMFVRARVEEG
VNQNALLVPQQAIARTPTGEATAMVVNADDKVDVRPVTAQEAIGDKWLITSGLKAGDRVI
SVGVQRVAQGAKVTPKEVSADQKDDTAATQSE
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaacagaggattaacccctctggcagcaatcctgatgttttcaggggcagtt
gcgctgagtggttgtgatgataaatcacagcagccagcacaaaaatctgcgcctgaagtc
ggtgttgtcactttgaaagccgcgcctgtgaatatgacgactgaattaccaggaagaacc
tctgcttatcgtgtagccgaagtacgtcctcaggtatcagggatcattttaaagcgtaat
tttatcgagggaacggatattaaagccggtgaatccctctaccaaatcgatccagcgccc
tatcaagccgcctacaacagcgcagtcggcgatttagctaaagcgcaagcgaatgcacgt
atcgcccaagtaacgctacaacgttataagcccctacttgggacgaaatacatcagccaa
caagattatgacacggcctctgcaacgctcgcacaaaataacgctgcagtccgttctgct
caagccgcggttgagaatgctcgaattaaccttgcttatacgaaagtatcttcacctatc
tcaggccggattggtaaaacagcggtcaccgaaggggctttggtacaaaatgggcaaacg
aatgcgttggcaacggttcaacaacttgacccgctgtatgtggatttaacccagtctagc
gacgattttatgcgtctacgtaaccagctcaactcgggtgaattgaagcaaggtgcaggt
aaagcgccggtaactatcgttttaaacgatggaacgaccttaaagcaaaaaggcacgttg
gaattttccgatgtgacggttgatcagactacgggctcaatcaccttacgcgccatcgtc
cctaacccagaccatagccttcttccaggaatgtttgttcgggctcgcgtagaggaaggc
gttaatcagaatgctttactcgttcctcagcaagcgatcgcacgtaccccaactggagaa
gccacagcgatggtggtgaatgccgatgataaagtcgatgttcgtcccgtcaccgctcaa
gaggctatcggcgataaatggctgatcacgtcaggcttaaaagctggtgaccgggtaatt
tctgttggtgtccagcgtgtcgcacaaggcgctaaggttacgccaaaagaagtcagcgct
gaccagaaagacgatactgccgcgacgcagtctgaataa
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