Tatumella sp. TA1: EFZ10_04955
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Entry
EFZ10_04955 CDS
T09934
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
tatu
Tatumella sp. TA1
Brite
KEGG Orthology (KO) [BR:
tatu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tatu03009
]
EFZ10_04955 (rlmC)
Enzymes [BR:
tatu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
EFZ10_04955 (rlmC)
Ribosome biogenesis [BR:
tatu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EFZ10_04955 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_15
Methyltransf_12
Cons_hypoth95
Methyltransf_11
Methyltransf_4
Methyltransf_32
UPF0020
TRM5-TYW2_MTfase
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
QGX91033
LinkDB
All DBs
Position
997907..999034
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AA seq
375 aa
AA seq
DB search
MFCPRYDAGQCRSCQWLPKDYATQLADKQSKVEQLLSNIPVTEWRPAVSSSQVRFRNKAK
MVVSGSVERPLLGIVDPQGEGVDLIDCPLYPESFAPVFRQLLPFIAKAGLTPYHIGRRKG
ELKYLLLTESTQGGMMLRFVLRSEKKLTQLKNALPELRQQLPQLTVISVNIQPVHMAIME
GEKEIIVSEDTALAEKFNDIPLWIRPQSFFQTNPEVAAKLYLTAREWTQPLKVERLWDLF
CGVGGFGLHCARAETQLTGIEISPEAIACAKDSAEKLGLKNTQFQALDATRYALDKTTPP
DLLLVNPPRRGIGQALCDFIVSVRPAAILYSSCNPETLAKDIASLTGYRLERVQLFDLFP
HTAHSEVLSLLMREA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgttttgccctcgttatgacgcgggtcagtgtcgctcttgccaatggcttcccaaggat
tacgcaacgcaactcgctgacaagcaatcaaaagtcgaacaacttctgagcaatattccc
gtaaccgagtggcgtcctgccgtgtcttcttcgcaagtacggtttcgcaataaagctaaa
atggtggtcagcggctctgtcgagcgccccttattaggtattgtcgatccgcaaggcgag
ggcgtggatttaattgattgccccctttatcccgagtcatttgcacccgttttccgccag
ctgcttccctttattgcgaaggccggtttgactccctatcatattggacgtcgcaagggc
gaacttaagtacctgttactcaccgaaagtacgcagggtggcatgatgctgcgcttcgtc
ttacgatcagagaaaaaactgacgcaattaaaaaatgcactgccggaactgcgacagcag
ttaccgcaattgaccgttatctctgtgaatattcagccggttcatatggcgattatggaa
ggcgaaaaagagatcatagtcagtgaagatacggccttggcggagaagttcaacgatatt
ccgttatggatccgaccgcagagctttttccagacaaaccccgaggtcgccgccaagctt
tacctcaccgcgcgcgaatggacacaaccgctgaaagtagagcggttatgggatctgttt
tgtggggtaggcggctttggactccattgcgccagagccgaaacgcaacttacgggaatt
gaaatctccccagaagcgatagcctgtgcgaaggactctgccgagaagcttgggctgaaa
aatacgcaatttcaggcactggatgcgacgcgctatgcgctggataaaacaacgcctcca
gatctcctgttagtgaatccgcctcggcgtggtatcggccaggccttatgtgactttatt
gtcagcgtacgcccagcggcgattctctattcaagctgcaatcccgaaaccctagcaaaa
gatattgcctcgctcaccggctaccgacttgagcgcgtacaactcttcgacctatttcct
cataccgcgcacagcgaagtgctttcattgttgatgagagaagcgtaa
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