Trichoderma atroviride: 25775711
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Entry
25775711 CDS
T10217
Symbol
TrAtP1_006683
Name
(RefSeq) uncharacterized protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
tatv Trichoderma atroviride
Pathway
tatv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
25775711 (TrAtP1_006683)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tatv03041
]
25775711 (TrAtP1_006683)
Spliceosome [BR:
tatv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
25775711 (TrAtP1_006683)
Complex C
U5 SnRNP specific factors
25775711 (TrAtP1_006683)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
DUF6716
Motif
Other DBs
NCBI-GeneID:
25775711
NCBI-ProteinID:
XP_013937950
UniProt:
G9PBP8
LinkDB
All DBs
Position
3:join(4283810..4283829,4283895..4284031,4284099..4286239,4286347..4286434,4286514..4287079)
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AA seq
983 aa
AA seq
DB search
MDDLYDEFGNFVGEEVESEEASEAGDEAADYAYDDEQEEAPSVTGQELMELDDGPSNAVI
LHEDKQYYPTAEQVYGAEVETRVEEVDAQPLTQPIIAPIEQKKFNIEEVDLPPVFFDREF
MADLMNFPEQTRNIALAGHLHHGKTAFMDMLVLETHDITDRLDRRVGKKRDEALRYTDVH
VLERERGISIKAAPMSLVLQSTKGKSHLLHIVDTPGHVNFVDEVAAAFRLVDGVCLVVDV
VEGVQINTEQIIKHAVLEDIPLTLIINKMDRLILELKLPPKDAYFKLKHVVEEVNTVIAN
TVPTKAASKRLSPEKGNVLFACTDMGWCFTLPSFAKMYTDTFGDINAEEFARRLWGDVYY
NPKKRNFTRKPAEDRSARSFVHFVLEPIYKIFTHAISDSPEQLRLVLSSLGIELKPSQYK
ADANVILKLVCEQFFGPSTGFVDMVVKHIPSPADGAQRLLERYYTGPLDTKVATSMQTCN
QDGPLVVHVSKLFNTSDAKSFYSFGRVLSGTARPGATVRVLGEGYSLDDEEDMTTASIGE
VFIAETRYNIPTDGVPAGNLVLLGGIDNSIVKTATVVPSKLEDDEDAFIFRPITHFTESV
LKVAVEPINPSELPKMLDGLRKIQKSYPLINTKVEESGEHVVLGTGELYMDCVLHDLRKL
YADMDIKISDPVTRFCETVVETSATKCYAITPNKKNKITMVAEQLEKGISNDIETGAVRI
RDPIRKTAKFFEDNHGWDKLAARSIWAFGPDEMGPNILQDDTLPTEVDKKLLTTVKESIR
QGFSWATREGPLCEEPIRNTKFKVTDVVLANEAIFRGGGQIIPTSRRACYSSFLMASPRL
MEPVYSVSVTGPEDSYMEVYNVLARRRGHVLSDGPVAGTPLYRVNGLIPVIDSFGFETDL
RIKTQGGSMVSLVFDSWSIIPGDPLDRDQVTRPLQPAAAQATARDFVLKTRRRKGLSEDV
SVKTFLEPEFYQSLMESGMLGDI
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctctatgatgagttcggaaacttcgtcggcgaagaggtcgagtccgaagaa
gcgtccgaggctggagatgaggcggctgactatgcatacgatgacgagcaagaggaggca
cccagtgtgactgggcaagagctcatggagcttgatgatggaccttcgaatgccgtcatc
cttcacgaagacaaacaatactaccccaccgctgagcaggtgtacggtgccgaagtcgag
acgcgcgtggaagaggtggatgcacagcctttaacacagcccatcattgcgccgatcgag
cagaagaagttcaacatcgaagaggttgacttgccgcccgtgtttttcgaccgcgagttc
atggccgatctaatgaactttcccgaacaaacaaggaacattgcgctggccggccactta
catcacggaaaaactgccttcatggacatgcttgtcttggagactcatgacatcactgac
aggcttgatcgaagagtcggcaagaagcgtgacgaggcgctgcgatacaccgacgtacac
gtgttggagagagagcgaggaatctccatcaaggctgcgccgatgagcctcgtcctgcag
agcacaaagggaaaatcgcacctgcttcacatcgttgatacccctggccatgtcaacttt
gtagatgaagtggcagcagcatttaggctagtggatggtgtatgtctggttgtcgacgtg
gttgagggcgtccagataaatacagagcaaatcatcaagcatgccgtgctggaagatatt
cccttgacactcatcatcaacaagatggatcgcctgattctggagttgaagctcccacca
aaggatgcttacttcaagctcaagcacgttgtagaggaagtcaacaccgtcattgccaac
accgtcccgaccaaggcggcttcaaagcgactgagccctgagaaaggcaatgttctgttc
gcctgcacagatatgggatggtgcttcacactgccctcttttgccaagatgtacacggac
acctttggcgatatcaacgcagaagagtttgctaggcgattgtggggagacgtttattac
aacccaaagaagcgaaacttcactcgcaaaccggcagaagacagatcagcaaggtcattt
gttcacttcgttctcgaacccatctacaaaatctttacacatgccattagcgacagcccg
gaacagctgagactagtcctgtcttcgcttggcatcgaactgaagccctcacagtacaaa
gccgatgccaatgtcatcctgaagttggtatgcgaacaattctttggtccttcaaccggt
tttgtcgacatggttgtcaagcacattccttccccagctgatggagcacaacgactactc
gagcgctactacactggacctttggacacaaaggtggcaacttcgatgcagacatgcaac
caggatgggcccctggtggttcatgtctcaaaactcttcaatacctctgatgcgaaaagc
ttctactctttcggtcgtgttctgagcggcactgctcgaccgggcgcaactgtgagagtc
cttggcgaaggatattctcttgatgacgaagaagacatgacgacagcctccatcggcgaa
gtattcatcgcagagacaaggtacaacatccctacggacggtgtcccagcgggtaacttg
gtattattgggaggcattgacaactccatcgttaagaccgcgacagtcgtaccatccaag
ctggaagatgacgaggatgccttcatcttcagacccattactcattttaccgaatctgtc
ctgaaagtggctgtcgagcccattaatccttccgaacttccaaaaatgcttgacggcctc
cgcaaaatccaaaagtcatacccccttatcaacacaaaagtggaagaatctggtgaacac
gtcgtcttgggaaccggagagctttacatggactgcgttctgcacgatttacggaagctg
tatgccgatatggatatcaaaatatcagatccagtaacaagattctgcgaaacggtagta
gaaacttcagcaacaaagtgttacgccatcacgccaaacaagaagaacaaaattaccatg
gtagcagagcagctggagaagggtatttctaacgacatcgagaccggtgccgtgagaata
cgtgatccgatacggaagacggccaagtttttcgaagacaaccatggctgggataagttg
gcggcaagaagtatttgggcttttggtcctgatgagatggggccaaacattcttcaggac
gatactttacctaccgaagtcgacaagaaacttttgactacagtcaaagaatctataagg
caaggcttcagttgggctactcgtgaaggccccctctgtgaagaacccatccgcaatacc
aaattcaaagttacggatgtggtattagccaacgaggccatcttccgcggtggtggccaa
atcattcccacttcccgaagagcatgctattcgtccttcctgatggcctctccgcgtctc
atggagcctgtttacagcgtctctgtcactggcccagaggactcttacatggaggtttac
aatgtgcttgcacggcgccgaggccacgtcctatccgatggccctgttgctggcacacct
ctctatcgtgtcaatggcctcattcctgtcattgacagttttggttttgaaacagatttg
cgaatcaagactcagggtggttccatggtcagcttggtattcgatagctggagcatcata
cccggtgatccgcttgatagagaccaggttacgaggccgcttcaacctgccgcggcgcag
gctacagccagagactttgtgctcaagaccagacggcgaaagggtttaagtgaagacgtc
agcgtcaagacattcttggaaccggaattctatcaaagcctgatggagagtggaatgctc
ggcgacatctaa
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