Trichoderma atroviride: 25780756
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Entry
25780756 CDS
T10217
Symbol
TrAtP1_007939
Name
(RefSeq) uncharacterized protein
KO
K07936
GTP-binding nuclear protein Ran
Organism
tatv Trichoderma atroviride
Pathway
tatv03008
Ribosome biogenesis in eukaryotes
tatv03013
Nucleocytoplasmic transport
tatv03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
25780756 (TrAtP1_007939)
03008 Ribosome biogenesis in eukaryotes
25780756 (TrAtP1_007939)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
25780756 (TrAtP1_007939)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tatv03019
]
25780756 (TrAtP1_007939)
03009 Ribosome biogenesis [BR:
tatv03009
]
25780756 (TrAtP1_007939)
03016 Transfer RNA biogenesis [BR:
tatv03016
]
25780756 (TrAtP1_007939)
03036 Chromosome and associated proteins [BR:
tatv03036
]
25780756 (TrAtP1_007939)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tatv04147
]
25780756 (TrAtP1_007939)
04031 GTP-binding proteins [BR:
tatv04031
]
25780756 (TrAtP1_007939)
Messenger RNA biogenesis [BR:
tatv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
25780756 (TrAtP1_007939)
Ribosome biogenesis [BR:
tatv03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
25780756 (TrAtP1_007939)
Pre-60S particles
25780756 (TrAtP1_007939)
Transfer RNA biogenesis [BR:
tatv03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
25780756 (TrAtP1_007939)
Chromosome and associated proteins [BR:
tatv03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
25780756 (TrAtP1_007939)
Spindle formation proteins
25780756 (TrAtP1_007939)
Exosome [BR:
tatv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
25780756 (TrAtP1_007939)
GTP-binding proteins [BR:
tatv04031
]
Small (monomeric) G-proteins
Ran Family
Ran
25780756 (TrAtP1_007939)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
G-alpha
Gtr1_RagA
RNA_helicase
Pox_A32
AAA_7
GTP_EFTU
TsaE
AAA_24
SRPRB
AAA_16
AAA_22
Septin
Motif
Other DBs
NCBI-GeneID:
25780756
NCBI-ProteinID:
XP_065969815
LinkDB
All DBs
Position
4:join(1894174..1894236,1894410..1894502,1894567..1894720,1894785..1894990,1895062..1895196)
Genome browser
AA seq
216 aa
AA seq
DB search
MAEQQTPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYMATLGVEVHPLGFTTNYGQIQFD
VWDTAGQEKFGGLRDGYYINGQCGIIMFDVTSRITYKNVPNWHRDLVRVCENIPIVLCGN
KVDVKERKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGNPQLEFVAAPAL
APPTAQVDEALLAQYKKEMDDAANMPLPGELSDDDL
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcaacagactcccaccttcaagcttgtgcttgtcggcgatggtggtaccggc
aagactacctttgtcaagcgacacttgactggtgaatttgagaagaagtacatggccacc
ctcggtgtcgaggttcacccccttggtttcaccacgaactacggtcagattcagttcgat
gtctgggacactgctggtcaggagaagttcggtggtcttcgtgatggttactacatcaac
ggccagtgcggcatcatcatgttcgatgtgacatctcgcatcacctacaagaacgtcccc
aactggcaccgtgatctcgtccgcgtctgcgaaaacatccccattgtcctgtgcggtaac
aaggtcgacgtcaaggagcgaaaggtcaaggccaagactattaccttccaccgcaagaag
aaccttcagtactacgacatctccgccaagtccaactacaacttcgagaagcccttcctg
tggcttgctcgcaagctggttggcaacccccagctggagttcgttgccgcccctgctctt
gctccccccactgcccaggtcgacgaggccctcctggctcagtacaagaaggagatggac
gacgccgcaaacatgccccttcctggtgagctgtccgacgatgatctgtaa
DBGET
integrated database retrieval system
