Trichoderma atroviride: 25782754
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Entry
25782754 CDS
T10217
Symbol
TrAtP1_003286
Name
(RefSeq) uncharacterized protein
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
tatv Trichoderma atroviride
Pathway
tatv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
25782754 (TrAtP1_003286)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tatv03400
]
25782754 (TrAtP1_003286)
Enzymes [BR:
tatv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
25782754 (TrAtP1_003286)
DNA repair and recombination proteins [BR:
tatv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
25782754 (TrAtP1_003286)
Prokaryotic type
25782754 (TrAtP1_003286)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
25782754
NCBI-ProteinID:
XP_065967900
LinkDB
All DBs
Position
2:1619543..1620466
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AA seq
307 aa
AA seq
DB search
MQHPRIFASSGFTLFHRPTIPPKRTTCIFKTHDIEPSAPWLSSNPPGPSVTMRTSRISKD
TAKLARRAADSASPPRRTTRSSLARFAHNAGVKTEQTPDIEDSITDPPTKRRRGSDASFS
AELAKDETDSDEDDKLNALLAAPAIPPKSARRARKPARKVSDPDTGESTVSPPSDWEEMY
NVVRKMRAPGGAAYGAAVDTMGCERLADRSASPRDQRLHSLIALMLSSQTKDTVTAVVMR
RLQTELPAYKPGAPVGLNLDNVLAVDENLLNQMIWAVGFHNNKTKFVLRRCLFFYCGPCA
WFYTALY
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatccccggattttcgcctcttcgggattcacgcttttccatcgacccacgatc
ccccctaaacgaacaacctgcattttcaaaacccatgacattgaaccgtccgcaccatgg
ctgtcaagtaatccacccggcccatccgtcacaatgcgaacatcacgaatatccaaagac
accgcaaagctggcgagacgagccgccgactctgcctcgccaccacggcgcacgacgcga
tcgtcgcttgcgcgtttcgcccacaatgcaggcgtcaagacggaacagacgccggatatc
gaagacagcatcactgacccgccgacgaaacgcaggagaggctccgatgcctccttctct
gccgaattggccaaggacgaaaccgactcggacgaagacgacaagctgaatgccttgtta
gcagctccggctatccctcccaagagcgcacgccgtgcccgcaagcccgcgcgcaaagtc
tcggatccggacaccggcgaatcgacagtctcccctccgtctgattgggaagagatgtac
aatgtcgtgaggaagatgcgtgcgccgggtggcgccgcctacggggctgcggtggacacg
atgggctgtgagcgcctggcggacaggagtgcttcgccgagggaccagcggctgcactcg
ctgatagcgctgatgctgtccagtcagaccaaggatacggtcacggcggtggtgatgcgg
aggctgcagacggagttgccggcgtacaagcccggagcgccggtgggcttgaatctggac
aatgtgctggcagtagatgagaatctgctgaaccagatgatttgggctgttggattccac
aataacaagaccaagttcgttctacgccgttgccttttcttctactgtggcccttgtgct
tggttttacacggcattatactaa
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