Trichoderma atroviride: 25783665
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Entry
25783665 CDS
T10217
Symbol
TrAtP1_011525
Name
(RefSeq) uncharacterized protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
tatv Trichoderma atroviride
Pathway
tatv03450
Non-homologous end-joining
Brite
Enzymes [BR:
tatv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
25783665 (TrAtP1_011525)
DNA repair and recombination proteins [BR:
tatv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
25783665 (TrAtP1_011525)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
25783665
NCBI-ProteinID:
XP_013940131
UniProt:
G9P960
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All DBs
Position
6:join(2768857..2768955,2769012..2769628,2769685..2769778,2769838..2769920,2769975..2771997)
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AA seq
971 aa
AA seq
DB search
MLGSSRIKELAIYKQPGLGLDLGDCVERILNATPNPTFPETLQVTVEEIDEALHSVAAKV
KWSSPAIRASDASFAESPARSVLETIYRRLSARDAKWFTRLVLKDFQPLVFDAYQVYRSC
DPVLPSILQIRQDFTIAIKTIQRLRKDGQSLEQGSAYIDRKCLALVKPQLSTKVGRQQWF
KARSIKHCIDMCTGLMSVEAKVDGEYCQIHVDVSRGRRGVQIFSKSGKDSTEDRKRLIGI
ITDSLGIGKAGCSIKTECILEGELVVYSELKKKILPFHHIRKHVTRRGWFMNTAEDVPPR
PHEHLMIVYYDILLLDGRSLLDVRHSERFKLLEEVVRCDRGQAELIQRQIINTNHPMAAS
ALRNAFAKVITDRSEGLVLKADQPYFNFHNYERPFTNHCIKLKKDYIGRFGEVGDFAVVG
AGFSAAKARSYNIDNVKWTHFYVGCIDNREQVKRWDATPEFTVINVVELNEAMLKTFMSC
TNPKPVSVEGNVETKLIFAAGAQTIPMTVAFTDPPVFDMRCFSFDKAGNTDWWSLRFPSV
AKIHFDRGYSDVLSFDELQKIAEAATAAPELEDSQDDLAWIAKLEQADPRGLAVDAATQL
TATTMPTPSPRRASHNSSDSMPLIRHVGESSLDRSVELLGIPVPEPHKVAATQPPPTVNP
FKISFLPNDKRKRAVSPPIFFSPSKKHRAVSINETSRRDASSHMLQPESPTRRALGEIDG
NSVQVPRVSGSHPTDCPPKSQNQNFSNPSMGNPEKDKGEHQQESGANRSTESSSSSPSLH
DSAIVIPDSEDEDDDTDDNVTVSSSPLAREDNERIEDQEYPNQDDKKAETSCHYAGSKCQ
LANRLILLPSYLSDIEELNPLLRAHGILNVVSDAEAWAKENAANTALSLDGQTGPNRILF
VDSVDKEPETKALLSKLEDIREAILEERREWISVFDWRVLNHLTIYEDEENTKKYYDGFH
DPWRRWYCGLV
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgcttggctcctctcgtatcaaggaactcgctatctataaacagcccggccttgggtta
gatcttggtgattgcgtagagcgtatcctgaatgctactcccaatccgactttcccagaa
acgcttcaggtgactgttgaggaaatcgatgaggctttgcactccgttgcagccaaagtg
aaatggagctcgccggctataagagcctcagacgctagctttgccgaatcacctgctcgc
agcgtgctggagacgatttatagacggctctctgctagagatgccaagtggtttacgaga
cttgttctcaaggactttcagcccctggtatttgatgcataccaagtgtatcgttcttgt
gacccagttttaccatcaatcttgcaaatccgccaagactttactattgctatcaaaact
atacaaagacttaggaaagacgggcaatccttagaacagggatcagcatatattgatcga
aaatgtttggcactggtcaagccacagctgtcaaccaaagtggggaggcagcaatggttc
aaagctcgcagcataaaacattgcattgacatgtgcacaggcttgatgagcgttgaggct
aaagttgatggggaatactgccaaatccatgttgatgtcagcagaggccggcgcggcgtt
caaatcttttccaagagtgggaaagatagcaccgaagacagaaagcgtctaattggaatt
atcacggattccttgggaataggcaaggctggatgcagtatcaagacagagtgtatcttg
gaaggagaattggtagtttatagcgagttgaaaaagaaaatcctcccttttcatcacatt
cgaaaacatgtcactcgtcgtggctggttcatgaatacagcggaggatgtcccgccgaga
ccccatgaacacctaatgattgtttattacgacatcttgcttctcgatggccgatcgtta
ctagatgttcggcactcggaacgctttaaactgcttgaggaagtagttcgttgtgatagg
gggcaagctgaactcatacaaaggcagataattaataccaatcacccaatggcagcttcg
gcattgcggaatgcatttgcgaaagtcatcacagacagaagcgaaggcctagtgctaaaa
gcagaccagccatatttcaactttcataactatgaacggccatttacaaatcattgcatc
aagctcaaaaaagactacatcggccgcttcggtgaggttggcgactttgccgtggttgga
gctggcttcagtgcggcaaaggcaagatcatacaatattgacaatgtcaaatggactcat
ttttatgtgggctgcattgacaacagggagcaagtcaagcggtgggatgctactccagaa
tttactgtcataaacgttgttgagctcaatgaagctatgctcaagacattcatgtcatgt
acaaacccaaaaccggtctcagtggaaggcaatgtcgagaccaaattgatatttgctgct
ggggcacaaacaatacccatgacagtggcatttactgatcctcctgttttcgacatgaga
tgctttagttttgacaaagcaggcaacacagactggtggagtttgagatttccatctgtt
gcaaagattcactttgaccggggttattctgatgtactatctttcgacgagctgcaaaag
attgcagaggccgccaccgctgcccctgagttggaagatagtcaggatgatctggcatgg
atcgcgaagctagagcaggcagacccaagaggattagctgtcgatgctgccacgcagctg
acggcaacgacgatgccaacgccatcgccgagacgggcttctcataattcgtcagactcg
atgcctctcatcagacatgtcggtgaaagctccctagatcgatcggttgaactcttaggc
ataccagtgccagagcctcataaagttgctgcaacgcaaccaccccctactgtgaaccct
tttaaaatctctttcttgcctaatgacaagagaaaacgtgctgtatctccaccgatcttc
ttctctccgtcgaaaaagcatcgtgcggtttctataaatgagacctcgcgacgagacgct
tcgagccacatgctccagcctgaatcaccaacccgtcgcgcattgggggagatagatggt
aattcagtgcaagtgcctcgtgtatcgggatcgcatcccactgactgcccgcctaaaagt
caaaaccaaaatttttccaatccttctatgggcaacccggagaaggataaaggtgagcat
cagcaggagagcggtgctaatagatccacagagtcgtcatcttcttccccttctttacac
gacagtgctattgtaataccagatagcgaggatgaggatgacgacaccgacgacaatgtt
accgtctcatcttcgcctctggcgagagaagataatgagcgaattgaagaccaagaatat
ccaaatcaagatgataaaaaagccgaaaccagctgtcattatgctggttctaaatgccag
ctagctaatcgactcatcttactaccatcgtacctttcggatatcgaagagctcaacccc
ttacttcgagcccacgggatattgaacgttgtcagcgacgccgaagcttgggctaaggag
aatgcagccaatactgctctatcgctagatggacaaacagggcccaataggatcctgttc
gtcgactcggtagacaaagagccagagacaaaggctttgctctctaaactggaagatatc
cgtgaagctattctcgaagaacgccgagaatggataagtgtttttgattggcgtgttttg
aatcaccttacaatttacgaagacgaagagaatacgaaaaagtattatgatgggtttcat
gatccgtggcggcgttggtactgtgggttggtctag
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