Trichoderma atroviride: 25785747
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Entry
25785747 CDS
T10217
Symbol
TrAtP1_009497
Name
(RefSeq) uncharacterized protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
tatv Trichoderma atroviride
Pathway
tatv03450
Non-homologous end-joining
Brite
Enzymes [BR:
tatv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
25785747 (TrAtP1_009497)
DNA repair and recombination proteins [BR:
tatv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
25785747 (TrAtP1_009497)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
25785747
NCBI-ProteinID:
XP_013946869
UniProt:
G9NLE6
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Position
5:join(911088..911197,911248..914104)
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AA seq
988 aa
AA seq
DB search
MSKWKAEEPKTPDEDALREEDLQYGTSGLTEEELAAKYPHKPKNHSKTLRFSELFKDLFN
PLNDNKKQPSASGPASKKGPHGLTKLSPQEQRRHIVERFITRWRKEVGDDFYPALRLILP
DKDRDRGVYGLKENAIGKLLVKLMKIDKNSEDGYNLLHWKLPGQTTGARLAGDFAGRCFE
VISKRPMRTQVGDMTVAEVNHELDKLAASAGEAENLRIFETFYNRMNAEELMWLIRIILK
QMKVGATEKTFLYLWHPDGETLFSVSSSLRRVCWELYDPEFRLEQDEAGIAPMQCLQPQL
AQFQMPASFQKMIELLRPTEDDPEFWIEEKLDGERMQMHMVEDADHPGGRRFCFWSRKAK
DYTYLYGNGLLDENSSLTRHLKNAFAPGVRNLILDGEMITWDMAVDKIVPFGTLKTAALA
EQSNKSESNAAGHRPLFRVFDILYLNDKQLTQYTLRDRRNALSKAVKSVHRRLEIHEYTR
ATSADAIEPLLREVVANASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCVII
GGYYGSGKRGGILSSFLCGLRVTQNHIQAGANPEKCFSFFKVGGGFRTEDYAEIRHRTDG
KWMEWDPKNPPSEYIELGGGDAKQYERPDMWIRPKDSVVVSVKAASVGPSDQFARGFTLR
FPRFRRLRLDRSWDTALSLEEFQELKQRVETELKQMEMTVEDRRRKNPKRMKKELVIAGD
DAAPPEFEGEKSKLFERLEFCVLSESLKPYKKTKAQLESIIKENGGSISQRAIAGTKMVL
IGDKKVVKVASLMKEGDVDIIRPIWIKDCLDQPNGGFLLPYEERHLFHATDGLIDSASLN
TDPLGESYARDTSVDELREVLQNMPKLEDAESFDKMLFLDQLEQHGKDFTTLRNFMFSQC
RVLFYLADGAMESVKDKWERFIRYGGGSCSQDLEDQSVTHIVVLGDDPMEVGDVGDKLRP
RLSSRGEDAAVGEVAVGGGELEGEDGVG
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatggaaagccgaagagccaaagactccagatgaggacgctctgagagaagaa
gacctgcagtatggaaccagtggcttgacagaggaggaattggctgcaaagtatccccat
aagcccaagaatcattccaagacgctgagattctcagagctcttcaaggacctgttcaat
ccgctaaatgacaacaagaagcagccgagcgcatcaggcccagccagcaaaaagggcccc
cacggactgaccaaactatcgccacaggaacagaggcggcatattgttgagaggttcatc
acgagatggaggaaagaagtcggcgacgacttttatcctgctctgcgtctcatcctgccg
gacaaggatcgcgatcgcggcgtctacgggctgaaggagaatgccataggcaagctcctg
gtgaagctgatgaagattgacaaaaactcggaagatggctacaatctcctacactggaag
ctgcctggccaaacgacgggagctcgtctggctggcgactttgccggccgatgcttcgaa
gtcatctcaaaacgcccaatgcgcacccaggtgggcgacatgaccgttgcagaagtcaac
cacgagttggataaactagctgcgtcagccggagaagctgagaatctgcgcatctttgag
actttctacaatcgcatgaatgccgaggagcttatgtggctcattcgcatcatcctgaaa
caaatgaaagtcggtgctacagaaaagacctttctgtatctatggcaccctgatggtgaa
acgctcttcagtgtgtcttcaagtctgaggcgcgtatgctgggaactctacgatccagaa
ttcaggcttgagcaggatgaagctggcatcgcgccgatgcagtgccttcagccgcagctt
gctcagttccaaatgccagcgtcgtttcaaaagatgattgaactccttcgacccacggaa
gacgatcctgaattttggatagaagaaaaattagatggcgaacgcatgcagatgcacatg
gttgaggatgccgaccaccccggtggacgaagattctgcttctggtcgagaaaggccaag
gattacacgtacctatacggcaatggcctgctggatgaaaactctagcttgacgaggcat
cttaaaaatgcatttgcacctggcgtacggaacctgattctagacggcgagatgattact
tgggacatggcagtcgacaagattgtcccctttggtactctaaagacggccgcccttgca
gagcagagcaacaagtccgaatcgaacgcagctggccaccggcccttgtttcgagtcttt
gatattctgtacctaaacgacaagcagcttacacagtacactctgcgcgatcgacgaaat
gctttgagcaaggcagtcaaatcggtacatcgacggctagaaatccacgagtatacacgc
gcaacctcggccgatgctattgagccgcttctacgagaagtggttgcgaacgcatcagag
ggcctcgtcttgaagaatcctcgatccatgtatcgcctcaacagccgcaacgacgactgg
ctaaaggtgaagccagaatacatgtccgaattcggtgaatctctcgactgtgtcattatc
ggtggctactatggttccggaaagcgaggaggaatcttatcaagcttcttgtgtggtctt
cgtgtgacgcagaaccacatccaggctggcgcaaacccggaaaaatgcttcagcttcttc
aaagtcggcggtggctttcgaaccgaggattatgcagagatacggcatcgcactgacggc
aagtggatggagtgggatcctaaaaacccgccgtcagagtacattgagttgggtggtggc
gatgccaagcagtatgaacgacctgatatgtggattcggccgaaagactctgttgttgtc
tctgtgaaagcggccagcgttggcccttcggaccaattcgctcgagggtttacgctgcga
ttccctcgatttcgaagactacggctcgatcgcagctgggacacggcgttgtctttggaa
gagtttcaagagcttaagcagagagtggagactgagttgaagcaaatggagatgactgtg
gaggaccgcaggaggaagaatccaaaacggatgaagaaggagcttgtcattgcgggcgat
gatgcggcgcctcccgagttcgaaggagaaaagtcgaagctgtttgaacgactagagttt
tgtgtgctgtccgagtcgttgaagccgtacaagaagaccaaggcgcagctggaatccatc
attaaagaaaacgggggctccatctcgcaaagggccattgctgggacaaagatggttctt
ataggagataagaaagtggtcaaggttgctagtctcatgaaagagggggacgttgatatt
attcggcctatttggatcaaagactgcctggatcaacctaatggaggatttttactgccg
tacgaggaaaggcatttgtttcatgcgacggatggcttgatcgacagtgcttctctgaat
acagatcctttgggcgagagctatgcccgcgatacgtctgtggacgagctaagagaggtg
ctccaaaacatgcccaagctcgaggacgcagaatcatttgacaagatgctgtttctggat
caactggagcagcatgggaaagattttacgactttgcgcaatttcatgttttcgcagtgc
agagtgctgttttacctcgcggacggggcaatggagagcgtaaaagacaagtgggagcgg
ttcatccggtatgggggcggttcgtgcagccaggatctggaggaccagagtgttacgcat
attgttgtgctgggggatgatccgatggaggttggggatgtgggggataagttgaggccg
aggctgagctcgaggggggaggatgccgcggttggtgaggttgcggtgggtggaggagag
ttggagggagaggacggtgttggatga
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