Thermodesulfovibrio autotrophicus: V4D30_04960
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Entry
V4D30_04960 CDS
T10573
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
taut Thermodesulfovibrio autotrophicus
Pathway
taut01501
beta-Lactam resistance
taut01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
taut00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
V4D30_04960
01503 Cationic antimicrobial peptide (CAMP) resistance
V4D30_04960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
taut03036
]
V4D30_04960
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
taut02000
]
V4D30_04960
01504 Antimicrobial resistance genes [BR:
taut01504
]
V4D30_04960
Chromosome and associated proteins [BR:
taut03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
V4D30_04960
Transporters [BR:
taut02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
V4D30_04960
Antimicrobial resistance genes [BR:
taut01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
V4D30_04960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
Beta-barrel_RND
HH_MFP_RND
YknX_C
BSH_CzcB
BSH_CusB
HH_EMRA
Beta-barrel_RND_2
HH_YBHG
DUF2203
DUF4349
SNaCT14
FBF1
TarH
BSH_LcnD
THOC7
CHASE3
Motif
Other DBs
NCBI-ProteinID:
XCH45687
UniProt:
A0AAU8GTG8
LinkDB
All DBs
Position
complement(976272..977399)
Genome browser
AA seq
375 aa
AA seq
DB search
MIAKFKPIFILSVMFFILTSCGKKQPPAQTPEVSVITVQAEKVLLTTELPGRTNPYRIAE
IRPQVSGIILKRYFTEGSNVKAGDLLYQIDPAPYKAAYDNALAALKRAEATLQSVKARYD
RYQELIKVNAISKQEFDDVKAQYEQTLSEIEALKAQVRNAQINLGYTKITAPISGRIGKS
NVTEGALVTAYQQMELTRIQQLDPIYVDIPYSTKELRELEKRLEQGRLKYAGKEQNKVKI
ILEDGTVYPVEGTLQFKDVTVDPTTGSVILRVIVPNPKGVLLPGMFVRAIVKEGINRHAI
LIPQQAVFRDPKGNPFVYIVDKENKVQIRPVKVDRAIEDKWLVSEGVSEGEQVIVEGVQK
IMPGMPVKAVPYGNK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgattgctaagtttaaacccattttcattttatctgtcatgttttttattcttacatca
tgcggtaaaaaacagcctccagcccaaactcctgaagtatcagtaataactgttcaagcc
gagaaagttcttcttacaacagagcttcccggaagaaccaatccttacaggatagctgag
ataagaccacaggtaagcggaataattcttaaaagatatttcacagaaggaagcaatgta
aaagcaggagacctcctttatcagattgatccagcaccgtataaagcagcctatgacaat
gctttggcagcattaaaaagagctgaggcaacccttcaatcagtaaaagcaagatatgac
agatatcaggagcttataaaggtaaatgcaataagtaagcaggagtttgatgatgtaaaa
gctcagtatgagcagactctctcagagattgaggcattaaaggcacaggtaaggaatgct
cagattaatcttggatatacgaaaataacagcgccaatttcaggtagaattggtaaatca
aatgtaaccgaaggtgctcttgtcacagcctatcagcaaatggagcttacacgaattcag
cagcttgacccaatttatgttgacataccttattcaacaaaggaattaagagagcttgaa
aaaagacttgaacagggaaggcttaaatatgctggtaaagagcagaataaggtaaaaata
attcttgaagatggaacagtctatccagtggaagggacacttcagtttaaggatgtaact
gttgatccaacaactggttctgtaattttaagggttatagttccaaatccaaagggagtg
cttttaccgggaatgtttgttagagcaatagttaaagagggaataaacaggcatgcaatt
cttattcctcagcaggcagtgtttcgtgatccaaaaggaaatccttttgtttatatcgtt
gataaagaaaacaaggttcagataagaccagttaaggttgaccgcgctatagaggataaa
tggcttgtctcagagggagtttcagagggagagcaggttatagttgaaggagttcagaaa
attatgccaggaatgcctgtaaaagccgttccttatggaaacaagtaa
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