Tamlana sp. s12: JJL45_01610
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Entry
JJL45_01610 CDS
T10518
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tay Tamlana sp. s12
Pathway
tay01501
beta-Lactam resistance
tay01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tay00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JJL45_01610
01503 Cationic antimicrobial peptide (CAMP) resistance
JJL45_01610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tay03036
]
JJL45_01610
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tay02000
]
JJL45_01610
01504 Antimicrobial resistance genes [BR:
tay01504
]
JJL45_01610
Chromosome and associated proteins [BR:
tay03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JJL45_01610
Transporters [BR:
tay02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JJL45_01610
Antimicrobial resistance genes [BR:
tay01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JJL45_01610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_CusB
Beta-barrel_RND
BSH_RND
BSH_YknX
RND-MFP_C
BSH_CzcB
Biotin_lipoyl
YknX_C
HH_MFP_RND
BSH_YhbJ
PTS_EIIA_1
HH_AprE
BSH_ALG44
Beta-barrel_RND_2
BSH_RND_rel
Motif
Other DBs
NCBI-ProteinID:
QQY82718
LinkDB
All DBs
Position
complement(380354..381481)
Genome browser
AA seq
375 aa
AA seq
DB search
MKRKHTYKLILFSAFLAVVGCGKQEKKEVAQGPPPSIPVIQLTTKTVTGFKEYPTNIEGV
INSDVRAKTAGYIQKVLVDEGQKVKKGQVLFKLETQALSEDAGAAKARVNVAQVEVDKLV
PLVEKNIISSVQLETAKANLAQAKANYSSIAANIGYATIRSQVDGHVGRINFREGALISP
NDATPLTTVSDIKEVYAFFSLNETEYLDFLEHAEGKSLEEKLSNYAEVNLILANGSLYSE
KGQIQTSSGQINQNTGTVSFRAVFDNPNQLLTNGNSGKIQIPTVYENHIVIPQEATFEQQ
GNIMVFKLQEGNKITTAMIEVKAAIEHLYVVESGLQKGDKIVMSGVGKLRNDMAITPQEV
PFEKAVKPIAKLFRN
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaagcacacctataaattaatccttttttcggcctttctcgcggttgttggc
tgtggtaaacaagaaaaaaaggaagtagctcaagggccaccaccatctattccagtcatt
caattaactacaaaaacagttactggttttaaagagtatcctacaaatattgagggggta
attaacagcgatgttagagcaaaaacggctggttatattcaaaaggttttagtagacgaa
ggtcagaaagtaaaaaaaggtcaggtgctttttaaacttgaaacgcaagctttatcggaa
gatgctggtgcggcaaaagcccgcgttaatgtggctcaagttgaggtggataaattagtt
cctttggtggaaaagaatattattagttcggtacagctagaaactgctaaagccaattta
gctcaagccaaagctaattatagcagtattgcagcaaatataggatacgctactataaga
agtcaagttgacggacacgttggaaggattaattttagagaaggagctttaattagtccg
aatgatgctacaccacttaccacggttagtgatattaaagaagtgtatgccttttttagc
ttaaatgaaaccgagtatttagattttttagaacatgccgaaggtaaaagtttagaagaa
aaattatctaattatgccgaggtgaatttaattttagctaatggttccctttattccgaa
aaaggtcagattcaaaccagctcgggacaaatcaatcagaatactggtacggtaagtttt
agggccgtttttgataatccaaatcagttattaaccaatgggaatagtggaaagattcaa
attccaacggtttacgaaaatcatatcgtgattccgcaagaagcgactttcgagcaacaa
gggaatattatggtttttaaactccaagaaggtaataagattacaacagccatgattgaa
gttaaagcggccatagaacatttatatgttgtagagtctggactgcaaaaaggtgataaa
attgtaatgtctggcgttgggaaactaagaaacgacatggccattacccctcaagaggtt
cctttcgaaaaggccgttaagccgattgcaaaattatttagaaactag
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