Thiobacillus denitrificans: Tbd_0114
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Entry
Tbd_0114 CDS
T00275
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
tbd
Thiobacillus denitrificans
Pathway
tbd00300
Lysine biosynthesis
tbd00550
Peptidoglycan biosynthesis
tbd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Tbd_0114
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Tbd_0114
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tbd01011
]
Tbd_0114
Enzymes [BR:
tbd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Tbd_0114
Peptidoglycan biosynthesis and degradation proteins [BR:
tbd01011
]
Precursor biosynthesis
Amino acid ligase
Tbd_0114
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxK
YqeC
Motif
Other DBs
NCBI-ProteinID:
AAZ96067
UniProt:
Q3SMH8
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All DBs
Position
120724..122244
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AA seq
506 aa
AA seq
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MAVRDSHNPLAASASMSIRESVPHILERLGLAPGELVNDSRRAAPGKVFVAYPGDARDGR
DFIPQAVAQGADGVLWEADHYQWDPALAIPNAGVAGLKTRIGEIAAHVYGEPSRALHMIG
VTGTNGKTSVAHWIAQALSALGRKTAIIGTVGNGFPSTGDTPAALTPALNTTPDAIELQQ
RLARYRGEGAVACAMEVSSHGLAQGRVNGCRFKVAVLTNLSRDHLDYHGDMDSYAAAKAR
LFNWPDLEWAVLNVDDAFGQRLEGETRPARVAGYGFQRGAVVARGLQLSQAGMHLALQTD
WGDAEIDAPLLGRFNAANLLAALTALLVSDVKLDDACRALAQVTPPAGRMQTLGGEAHPL
VVVDYSHTPDALEKVLATLREIAGGGRLICVFGCGGNRDKGKRPLMGAAAGRGADEIWVT
SDNPRHEDPRAIIDDIRAGLAEAEAEGRVRVEAERARAIFEAVGGAHHGDVVLIAGKGHE
DYQEVAGERLPFSDIAMARKALEAWA
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgcgcgactctcacaacccgcttgccgcgagcgcgtcgatgtcgatccgcgaa
tcggtgccgcacatcctcgaacggctcggtctggcaccgggcgagctcgtcaacgacagc
cggcgcgccgcgccgggcaaggtgttcgttgcctacccgggcgacgcccgcgacggccgc
gacttcatcccgcaggcggtggcccagggcgccgacggtgtgctgtgggaggccgatcac
tatcagtgggatcccgcgctcgcgatcccgaacgccggcgtcgccggactcaagacccgc
atcggcgaaatcgcggcacacgtctacggcgagccgtcgcgggcgctgcacatgatcggc
gtcaccggcaccaacggcaaaacctcggtcgcgcactggatcgcgcaggcgctgtcggcg
ctcggccgcaagaccgcgatcatcggcaccgtcggcaacggcttcccgtccacgggcgac
acgcccgctgcgctcacaccggcgctcaacacgacgccagacgcgatcgagctccagcag
cgcctcgcgcgctaccgcggcgagggcgcggtcgcctgtgccatggaagtctcgtcgcac
ggcctcgcgcagggccgcgtcaacgggtgccgcttcaaggtcgcagtgctgaccaacctg
tcgcgtgaccatctcgactaccacggcgacatggacagctacgccgctgcgaaggcgcgt
ctcttcaactggcccgatctcgagtgggcggtgctgaacgtcgacgacgcgttcgggcag
cgcctcgagggcgagacgcggccggcgcgtgttgccggctacggtttccagcgcggcgcc
gtcgtcgcgcgcggtctccagttgtcgcaggcaggcatgcatctggcgttgcagaccgac
tggggcgacgccgagatcgacgcgccgctgctcggccgcttcaacgccgcgaacctgctc
gccgcgctgaccgcgctgctggtctccgacgtgaagctcgacgacgcgtgtcgcgcgctc
gcgcaggtcacgccccctgccgggcgcatgcagacgctgggcggcgaggcgcatccgctg
gtcgtggtcgactactcgcatacgccggacgcgctcgagaaagtgctcgcgacgctgcga
gaaatcgcgggcgggggccggctgatctgcgtattcggctgcggcggcaatcgcgacaag
ggcaagcgccccctgatgggcgcagcggctggccgtggcgctgacgagatatgggtcacg
agcgacaacccgcgccacgaggatccgcgcgccatcatcgacgacatccgcgcggggctt
gccgaggccgaggcggagggtcgggtgcgcgtcgaggccgagcgcgcccgcgcgatattc
gaggcggtcggcggcgcgcatcacggcgacgtcgtgctgatcgcaggcaagggccacgag
gactatcaggaagtcgcgggcgaacgtctgccgttttcggatattgcaatggcgagaaag
gcgctggaggcttgggcatga
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