Trematomus bernacchii (emerald rockcod): 117468803
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Entry
117468803 CDS
T09643
Symbol
trpc6b
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117468803 (trpc6b)
Ion channels [BR:
tben04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117468803 (trpc6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_4
RpoY
RIN1
Motif
Other DBs
NCBI-GeneID:
117468803
NCBI-ProteinID:
XP_033968994
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
MMRKSSSTNKQGILRNSGRRSNDQRAMTMQHVVHKSRKQVLRGAGYLYRAESSFCLSMAE
ELFLDAAEYGNIPEVRRMLEEQPELNINCVNYMGQNALQLAVANEHFEVTKLLLRRKDLA
RIGDALLLAISKGYIRIVEALLGHEAFADGQRLTNSPSQVDPHDDFFAYDEDGTRFSHDI
TPIILASQCHEYEIVHILLMKGSRVERPHDYFCQCRTCSEHQRHDSFRHSQSRINAYKCL
ASPAYLSLSNEDPVMAALEMSNELEVLSNIEKEFKNDYKKLSMQCKDFVVGLLDLCRNTE
EVKAILNGDTESCPSPETLGRQNLIRLKLAIKYEVKKFVAHPNCQQQLLSIWYENLSGLR
QQTTAVKILLVLGVAFGLPILSFLYWIAPSSKLGKLMRGPFLKFVAHAASFMIFLCLLVL
NAADRFGGTSLLPNMTTHDHPSQLFRMKTTPFTWMEILIISWVIGKIWEECKDIWSQDIR
EYISEPWNLLDFSILAIFMTSFIARLMAFWHAYSAQCYVDKHYTDLSNMTLPFEIQYFQL
ARINWMPSDPQLISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDLFKFMVIF
ITVFLAFMVGMFNLYSYYLGAKYNDAFTTLEESFKTLFWAIFGLSEVKSVVINIDHKFIE
NIGYVLYGVYNIIMVIVLLNMLIAMFNSSFQEIEDDSDVEWKFARAKLWFSYFEHGGTLS
VPFNLVPSPKSVLSLLLGIRELLWDGPKGKIKGNSNDEMELNKLRQQSDLSVDASLCPTR
HQSIMNRLVKRYIVKAQRDKENDEINEGELKEIKQDISSLRYELLERANRDVETVTKLIR
QLGEVMHVQQKEEQKNEISFIY
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggaagagcagcagcacaaataaacaagggattcttagaaactcaggcaggcgg
agcaatgatcagagagccatgacgatgcagcatgtcgtgcacaaatcccggaagcaggta
ttacggggagctggttacctgtatcgtgcggagtcctccttctgcctttccatggcagag
gagcttttcttagatgctgcagaatatggaaacattcctgaagtgaggcggatgttagag
gagcagccagagctcaacatcaactgtgtgaactacatgggccagaatgcattgcagcta
gcagttgcaaatgagcattttgaagtcactaagctcctgctaaggaggaaagacctggct
cgaattggagatgctctactgttagccatcagtaaaggctacatccgtatagtggaagct
ttactgggccatgaggccttcgcagacggacagaggctgaccaacagtcccagccaggtg
gacccacatgatgacttcttcgcctatgatgaggatggcacacgtttctctcatgacatc
acccccatcatactggcttcccagtgccacgagtatgaaattgtgcatatacttcttatg
aagggatcccgtgtagaacgcccccatgactacttctgccagtgcaggacctgcagcgag
catcagaggcacgactcattcagacattcacaatcacgcatcaatgcatataaatgtctg
gccagtcctgcttatctgtccctctccaatgaagacccggtgatggcggctttggagatg
agcaatgagcttgaagttctatccaatattgagaaggagtttaagaatgattacaagaag
ctatccatgcagtgtaaagattttgtggtgggactgctggatttgtgtcgaaacacagag
gaagtgaaggccatcttaaacggggacactgaatcatgtccaagcccagagaccttgggc
agacaaaacctaatcaggttaaaacttgcaataaagtatgaagttaaaaagtttgtggca
catccaaactgccaacagcaactcctctctatctggtacgagaacttgtccggattacgt
cagcagaccacagcagttaaaatccttcttgttcttggtgtagcgtttggattgccaatc
ctgtcctttttgtactggatagcaccatcaagtaagttagggaaactcatgcgtggacct
ttcctgaagttcgtggcccatgcagcctcctttatgatatttctttgcctgctggtcctg
aacgcagcagaccgctttgggggaacatcactgctgcccaacatgaccacccatgatcac
ccctctcaactgtttcgtatgaagaccacccccttcacctggatggagattctcatcata
tcctgggtcataggaaagatctgggaagaatgtaaagatatttggtcgcaggacatcagg
gaatacatctcagagccctggaaccttcttgactttagtatcttggccatttttatgaca
tctttcattgccagattaatggctttctggcatgcatattctgcccagtgttatgttgac
aagcactacactgacctgtccaacatgaccttgccatttgagatacaatatttccagctg
gctcgtatcaactggatgccatcggacccacagcttatctctgaaggcctctatgcaatt
gcagttgtgctgagtttctctcgcattgcatacatcctgcctgccaacgagagctttggg
cctttacagatctctttaggaagaacagttaaagacctctttaagttcatggtgatcttc
ataacagtctttctggctttcatggtgggaatgttcaatctgtactcgtactacctcggg
gccaaatacaacgatgccttcacaacgctcgaagagagttttaaaacgctattttgggcc
atctttggcttgtcagaagtcaaatcagtggtcatcaacatcgaccataaattcattgag
aatattggctatgttctgtatggggtgtacaacatcatcatggtgattgtgttgctgaat
atgctcattgccatgttcaacagctccttccaagaaattgaggatgattctgatgttgag
tggaagtttgccagagctaagctgtggttctcgtactttgagcatggcggcaccctgtcc
gtgcccttcaacctcgtacccagccccaagtctgtcctttccctcttgcttgggataagg
gaacttctttgggatggaccgaaaggcaaaataaaaggaaattcaaatgatgagatggag
cttaataagttgaggcagcagtcagatctgagtgtggatgcatcgctttgtccaacccgt
caccaaagtataatgaatcgcctcgtcaaaagatacatagtaaaagcacagcgagataaa
gaaaatgatgaaattaatgaaggtgagctgaaagaaatcaaacaggacatctccagtctc
cgctatgagctgctggaaagggccaaccgggacgtggagacagtgacaaaactcatcagg
caactgggagaagtcatgcatgttcagcagaaagaagagcagaagaatgagatctctttc
atttattaa
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