Trematomus bernacchii (emerald rockcod): 117469841
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Entry
117469841 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: F-box/WD repeat-containing protein 7-like
KO
K10260
F-box and WD-40 domain protein 7
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117469841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117469841
04121 Ubiquitin system [BR:
tben04121
]
117469841
Membrane trafficking [BR:
tben04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
117469841
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117469841
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR3_2nd
EIF3I
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_SCAP
Beta-prop_TEP1_C
DSE1_N
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR41
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
F-box-like
NBCH_WD40
ASA1
WDR90_beta-prop_4th
Beta-prop_Nup120_160
Beta-prop_SPT8
PAC11
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_Aladin
CFAP251_N
TRM82_WD
Beta-prop_VPS8
Beta-prop_NOL10_N
F-box
Beta-prop_IFT140_1st
PQQ_2
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
117469841
NCBI-ProteinID:
XP_033970190
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MDNEHQERREEEEEEEMKAGKVINGHTPIFASSSLTSFPFLSSSSLCRGREEDEEEVSVA
IVTIDDESCPSEPFGPALLETANQIARIEGGGDKEEEEEEERNSEEEEMTSPSPHLMKRK
LDHGPDGRPFSSGKKHCKGNGYLSPASLVQATTPTTFGDLRLANGLSAQRRRVTSGPPPS
GLQDWLHIFQAWSGPERLLALDELIDRCETGQVKHMMQVIEPQFQRDFISLLPKEVACTL
LTFLAPKDLTAAAQTCRYWRILAEDNLLWREKCREEGVSEYSSRRRKSSSPPAETSSWKS
AFLSQHRIESNWRSGDTREPMVLKGHDEHVITCLQFSGDLIVSGSDDNTLRVWSAVSGKC
LRTLSGHTGGVWCSQMSVATVISGSTDRTLRVWDAESGECVHTLYGHTSTVRCMHLHGDR
VVSGSRDTTLRVWCVSTGRCVCVLSGHVAAVRCVQYDGRRVVSGGYDYMVKVWDAETEAC
LHTLQGHTNRVYSLQFDGAFVVSGSLDTSIRVWDAETGGCVHTLTGHQSLTSGMELRENI
LVSGNADSTVRVWDIQSGKCLHTLQGPNKHQSAVTCLQFCRGLVLSSSDDGTVKLWDLKT
GSWVRDVVTLQSRGAGGVVWRIRASDTRLVCAAGSRNGTEETKLLVLDFDLDDRTTEEE
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgagcatcaagagaggagagaagaggaagaggaggaggagatgaaggcaggc
aaagtaataaatggacacactcccatcttcgcctcctcctccctcacctccttccctttc
ctctcctcctcctctctgtgccgaggaagagaggaagacgaagaggaggtgagcgtcgcc
atcgtcaccatcgacgacgagtcctgtccgtcagagccgtttggacccgccctcctggag
acggccaatcagatcgcacggattgagggagggggagataaggaggaagaggaagaggag
gagagaaacagcgaggaagaggaaatgacgtcaccatctcctcacctgatgaagaggaag
ctggatcacggtccagacgggcggcccttttcctcggggaagaaacactgcaaaggcaac
ggatacctcagtccggcctctctggtccaggccaccactcccaccacatttggggacctg
aggctggccaatgggctttcagctcagcggcggcgcgtcacctcgggacctccaccctcc
ggcctgcaggactggctccacatcttccaggcgtggagtggtcctgagcgtctcttggct
ctggatgagttgattgacaggtgtgaaacaggccaggtgaagcacatgatgcaggtgatc
gagcctcagttccagagagacttcatctcccttctgcccaaagaggtcgcctgtacgttg
ctcaccttcctggctcctaaagacctgactgcagcggctcagacctgcagatactggagg
atcctagctgaagataatctgctgtggagagagaagtgccgagaagaaggtgtgtcggag
tactcgtctcggcgcaggaagtcttcttcgccccccgcggagacgtccagctggaagtca
gcgttcctcagtcagcatcgcatcgagagcaactggaggagcggggacacgcgggagccc
atggtgctgaagggtcacgatgaacatgtgatcacgtgtcttcagttcagtggagatctg
atcgtcagcggctccgacgacaacactctgagagtctggtcggccgtcagtgggaagtgt
ctccgcacgttgtcaggtcacactgggggggtgtggtgcagtcagatgtctgttgccacg
gtgatcagcggctccactgataggacgctgcgtgtttgggacgcagagagtggcgagtgt
gttcacacactgtacggacacacgtccaccgtgcgctgcatgcatctccatggagacagg
gtggtgtcgggctcgcgggacacgacgctgcgtgtgtggtgtgtgtcgacgggcaggtgt
gtgtgtgtgttgtcgggccacgtggcggcggtgcgctgcgtgcagtatgacgggcggcgc
gtggtgtcgggggggtacgactacatggtgaaggtctgggacgctgagacggaggcctgc
ctacacacactgcagggacacaccaacagagtgtactcactgcagtttgacggtgcgttc
gtggtcagcggctcgttggacacctccatcagagtctgggacgcagagaccggtggctgt
gtgcacaccctcactggtcaccagtccctcaccagtgggatggagctccgggaaaacatc
ctggtttctgggaacgccgactccacggtccgagtgtgggacatccagagcggaaagtgt
ctgcacaccctgcaaggtcccaataagcaccagtcggcggtgacgtgtctccagttctgc
agaggactggttctgtccagttctgacgacggtacggtgaaactttgggacctgaagacg
ggctcctgggtccgagacgtggtgacgctgcagagccgaggagcaggaggcgtggtgtgg
aggatccgagcgtccgacactcgtctggtttgtgccgccggcagccggaacggcaccgaa
gaaaccaagctgctcgtcctcgacttcgatctggacgaccgcacgacggaagaggagtga
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integrated database retrieval system
