Trematomus bernacchii (emerald rockcod): 117470620
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Entry
117470620 CDS
T09643
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tben01009
]
117470620
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117470620
Protein phosphatases and associated proteins [BR:
tben01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117470620
Ion channels [BR:
tben04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117470620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
YVC1_C
Retinal
Motif
Other DBs
NCBI-GeneID:
117470620
NCBI-ProteinID:
XP_033971326
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MQGPPPTLVEWMILPWVVGFIWAEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKI
VAYFKYNSSRPREEWEMWHPTLIAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRML
LDILKFLFIYCLVLLAFANGLNQLYFYYETKASEEPNNCKGIRCERQNNAFSTLFETLQS
LFWSIFGLLNLYVTNVKARHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADH
ADIEWKFARTKLWMSYFDEGGTLPPPFNIIPSPKSILFLLLWLHNKLCRGGGPAGEHSHK
CENLREFTERHADSLIQNQHYQEVIRSLVKRYVAAMIRSAKTDEGLTEENFKELKQDISS
FRYEVLDLLGNRRPPRRHYSSSSETTRDDGAAASEDDSESGDGCSSQRSKGVTFMTPMED
EEDEKRQSPTLGVSELVRSISGMTRIEGVGDGEEEEEEEEEEEEEGKPKSNGLKTAVVPH
SSSSPSSFSSTFSSSFARTRSRLQRLAPGSKTDSFKRLSFLFSRSKRRAPPTPLQSSSSS
YTISDGFLRPLRSHDFDLDDVSRSESRLHEVGRRRRSGDLIIGDPAFSPRRTNGGRDSLL
LPLPPPCPCQSLHCASNMSESSSRLLDSSEDVFQGEGGAGGGVEEGGGGGGGGGGVGVMM
VMGGWVGPCGDDVIGDSCDVIEESVTTQL
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcagggacccccccccaccctcgtggagtggatgatcctcccctgggtggttggcttc
atctgggcggagattaaggagatgtgggacggaggcttcacagaatatatccacgactgg
tggaacctgatggacttcgccatgaactctctgtacctcgccaccatctcgctgaagata
gtggcctacttcaaatataactcctctcggcccagggaggagtgggagatgtggcacccg
accctcatcgccgaggctctgtttgccatcgctaacatcttcagctctctgaggctcatc
tctctcttcaccgctaactcccacctgggcccgctgcagatctccctggggaggatgctg
ctggacatcctcaagttcctcttcatctactgcctggtgctgctggcgtttgcaaacggt
ctgaaccagctgtacttctactacgagacgaaggcctccgaggagccgaacaactgcaaa
ggcatccgctgtgagaggcagaacaacgccttctccacgttgttcgagacgctgcagtcg
ttgttctggtcgatattcgggcttctgaatctgtacgtgaccaacgtgaaggcgaggcac
gagttcacggagtttgtcggggcgacgatgttcgggacgtacaacgtgatttctctggtg
gttctgctcaacatgctgatcgccatgatgaacaactcctaccagctcatcgccgatcac
gccgacatcgagtggaagtttgctcgcaccaaactgtggatgagttactttgacgagggc
ggcacgctgcccccccccttcaacatcatcccctcccccaaatccatcctcttcctgctg
ctgtggctccacaacaagctgtgcagggggggcggccccgcaggcgagcactcgcacaag
tgtgagaacctgcgggagttcacagaacgccacgctgacagtctgattcagaaccagcat
taccaggaagtgatccgcagcctggtgaagaggtacgtggcggccatgatacgcagcgcc
aagacggacgagggactgacggaggaaaactttaaggagttgaagcaggacatctccagt
ttccgatacgaagtcctggatctcctcggcaaccgtcgtcctccccggcgacactactcc
tcgtccagcgagacgacgagagacgacggcgccgcggcgtcagaagacgacagcgaatca
ggcgacggctgctcgagccagaggtcaaagggcgtgaccttcatgacgccgatggaggac
gaggaggacgagaagaggcagtcgccaacgctcggcgtgtccgagttggtgcgctcgatc
tcgggcatgacgaggatagaaggagtgggcgatggcgaggaggaagaggaggaagaagag
gaggaggaagaggaggggaaaccaaagagcaacgggctgaaaacggccgtcgtccctcat
tcctcctcctccccttcgtctttctcctcgactttctcctcgtcgttcgcccgcacgagg
agtcgcctgcagcgcctggctcccgggtcgaaaacggactccttcaaacgcctctccttc
ctgttttcccgctcaaaacgccgagccccgcccacgccgttgcagtcctcctcgtcgtcc
tacaccatctcagacgggttcctgcgccccctgcggagccacgacttcgacctggacgac
gtgtcgaggagcgagtcgcgtctgcacgaagtgggacgccgtcgacggtcgggcgacctc
atcatcggcgacccggcgttctccccgcggaggacgaacggggggcgggactccctcctc
ttgcccctcccccctccgtgcccctgccaatcactgcactgcgcttccaacatgtcagaa
tccagctcccgcctcctggactccagcgaggacgttttccagggcgaaggaggagcaggt
ggaggtgtggaggaaggaggaggaggaggaggaggaggggggggggtcggggtgatgatg
gtgatgggcgggtgggttggaccgtgcggtgatgatgtcatcggggacagctgtgatgtc
atagaggaatctgtcaccacgcagctatag
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