Trematomus bernacchii (emerald rockcod): 117470739
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Entry
117470739 CDS
T09643
Name
(RefSeq) caspase recruitment domain-containing protein 8-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117470739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117470739
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tben04054
]
117470739
Membrane trafficking [BR:
tben04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
117470739
Pattern recognition receptors [BR:
tben04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117470739
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FIIND
UPA-FIIND
CARD
Motif
Other DBs
NCBI-GeneID:
117470739
NCBI-ProteinID:
XP_033971482
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MDDLRKDNPRATSPPRYVERIWLKGDETKPEKSNTYDHYGKEDETTEAQDFVTFSPAVFQ
CRFQQPLYRYKFPGPGAFRCNLTNLVFVMAKEAELTYMTLIWDEDLLNSGGKTPAGPLFE
IKSAVEDALTQLRFPHGETKEAMKDGALSVADISDEGMSILKPLEMTETHVVVDVPHLSS
FGLVWHIIKRFMTKNRPIRSQLMLYLRTPIKELQIMTVIVLQENVPLHEISRQQNGAQRV
RIPSHCQLDFGNKYSIHVDPEDLFLQPMHDEFSPRFGPNYHPTFEVFLDTSTESLNLKLQ
DQSGKVAWENRVYLQEARWLMSRRMPYSDMQLISHRTALSNGISPDTLEKLLDVLIENTI
LTDEQIESVRAKPQEERAREVLQMVQYKGRDPSTILLSALREVDPVICKELEIDY
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggatgatttaagaaaggacaatcctagagccaccagccctcctcggtatgtggagagg
atatggctgaagggcgacgagaccaagcctgagaaatcaaacacctatgaccactatggc
aaagaggatgagacaacagaagcacaggattttgtaaccttctcacctgcagtgtttcaa
tgcaggttccaacaacctctatacaggtacaagttccctggtcccggtgcgttccggtgt
aatttgaccaacctggtgttcgtaatggctaaagaggcagagctgacgtacatgaccctc
atttgggacgaagacctcctcaactcaggcggaaagacgcctgcagggccgctgttcgaa
atcaagagtgctgtcgaggacgccctaactcagctccgcttcccccacggtgaaacaaag
gaagcgatgaaggatggcgcattgtctgtggctgacatctctgatgagggaatgagcatc
ttgaagccgctggagatgacagagactcacgtggtcgtggacgtccctcacctctcttcc
tttggcctggtttggcacatcatcaaaaggtttatgacaaagaaccggccaataaggagc
caactcatgctgtacctacgaacaccgatcaaagagcttcaaataatgaccgtgattgtc
ctgcaggagaacgtccctttgcatgagatttccagacaacaaaatggtgctcagcgcgta
aggatcccaagccactgtcagctggactttggtaacaaatacagcattcacgttgatcct
gaagacctgttcctgcagccaatgcatgatgaattctcacccaggttcggaccaaattac
catccgacatttgaagttttcctggacacgagcacagagtccctgaacttgaagctccag
gaccagagtgggaaagtagcctgggaaaacagagtgtatctgcaagaagcaagatggtta
atgtcccggcgaatgccctattcagacatgcagctgatctctcatcggacagcgctcagc
aatgggatatctccagatactctggagaagcttctcgatgtgcttatcgagaatacaatt
ctaactgatgagcaaattgaatcagtccgcgccaaaccccaagaagaaagagcaagagag
gtgctgcagatggtgcaatacaagggacgagatcccagcacaatcctgctctccgctctc
cgtgaggtcgacccggtgatctgcaaagagcttgagatagactactaa
DBGET
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