Trematomus bernacchii (emerald rockcod): 117471319 Help Entry 117471319         CDS       T09643                                  Symbol fbn1 Name (RefSeq) fibrillin-1   KO K06825   fibrillin 1 Organism tben  Trematomus bernacchii (emerald rockcod) Pathway tben04350   TGF-beta signaling pathway tben04518   Integrin signaling tben04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:tben00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     117471319 (fbn1)   09133 Signaling molecules and interaction    04518 Integrin signaling     117471319 (fbn1)  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     117471319 (fbn1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:tben00536]     117471319 (fbn1) Glycosaminoglycan binding proteins [BR:tben00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    117471319 (fbn1) SSDB OrthologParalogGFIT Motif Pfam:  EGF_CA cEGF EGF hEGF FXa_inhibition TB EGF_3 Fibrillin_U_N Plasmod_Pvs28 EGF_FBN_1st EGF_PEAR1L Motif Other DBs NCBI-GeneID:  117471319 NCBI-ProteinID:  XP_033972109 LinkDB All DBs Position Unknown AA seq 2908 aa AA seqDB search MPDSKCGGRLLQLAVALVALLSLAELGHFAEVVDTEDSEPTAKQTDSRASRAKRRGGSDV LRGPNVCGSRNNAYCCPGWKTLTGGNQCIVPICRSSCGDGFCSRPNMCTCPTGQISPACG SKSVQNCNIRCMNGGTCAEDNCQCQKGYVGNHCGQPVCENGCLNGGRCVAPNKCVCTYGF TGAQCERDYRTGPCFASVHNQMCQGQLTGIVCTKTLCCATVGRAWGHPCEMCPAQPHPCR RGFIPNHRSGACQDVDECQAIPGLCQGGNCINTVGSFECKCPAGHKFNEVSQKCDDLDEC SNIQGLCGVGECSNTVGSYICKCPQGYYTSLDGSKCIDSRGGYCYASVLNGRCANQNSQL LTKMQCCCDSGRCWSDGSSPEMCPFRGSEEYQKLCIQIPDGNNGVVPGRVPGSPDLPAIY PLPYPGQNPGQLPLYPGQNPGQLPLYPGQNPGQVPVIPGQFPFPGQLPLQPRPGSGIILT QNITNMCQAFRNLCLNGRCIPMPSIGYRCECNMGFRLDGRGECLDDDECERSPCAHGECV NTPGSYICQCPAGFQTTATRTECRDLDECVANGRICNNGRCVNTVGSFHCVCNAGFEITS DGKNCQDQDECLIRNMCLNGLCINDDGSFKCICKPGFLLDGNGRMCVDIDECETPGMCMN GHCINTEGSFRCECMAGMAVGLDGRVCVDTHMRSSCYGGYMRGQCVRPLFGAVTKSECCC ASIEYAYGEPCQPCPPESSADFLALCPSGPGISGDGRDINECALDPDICQNGVCENMLRT YKCTCNEGFEIDLTGKNCVDIDECLMNRQLCDNGQCRNTPGSFTCHCPKGFVFDPETDVC EDVDECLSNPCINGDCKNSLGSFVCLCSTSSSLDSTGMECIETTKSTCWLKIVNNRCEVN INGATLKSHCCATLGEAWNSPCAKCEKDPFCGKGLARVKGNICEDVDECRVFPGVCINGK CINTPGSFFCQCPPGMTVDISGRTCIDLRMEHCYLTHEDERCVAPISGKQRVDACCCSVG VAWGPECDECPEKGTPEYNQLCPRGPGFSHRGDFINGRPFLKDLNECRMINTLCSNGRCR NTIGSFRCRCDNGYALDSDERNCTDIDECRISVDLCGQGRCINTAGDFECECFEGYESGF MMMKNCMDIDECERNPLLCRGGECLNTEGSFQCLCPDGHEIAPDGSACLDINECDLSDRL CRNGQCVNMIGRYQCTCDTGYKSTENRVECVDIDECTIENGGCETFCTNSEGSYECSCHS GYALMPDLRTCTDIDECEESPDICDGGQCTNTPGTYQCLCYDGFMSSEDMKTCLDVDECE LNPDICLSGNCENAKGSFICHCDPGYSVRKGTTGCTDVNECEIGAHNCDRQATCTNTAGG FKCHCAPGWIGNGVKCTDLDECSNGTHMCNNNAECLNTMGSYRCACKEGFSGDGFYCSDS DECADNGNLCESGHCLNLPGGYRCECDMGFIPTPDQKSCEDIDECTFADICVNGRCQNIP GLFRCDCSLGYELDRSGGNCTDINECADPTICINGVCVNIPGSYLCNCPADFELNPTRVG CVDTRSGSCYLDVRSRGDASESLDCSNEIGVGVSKASCCCSLGQGWGNPCESCPALNSTE YKTLCPGGEGFRPNPITVILEDINECQELPGLCQGGQCINTFGSFQCECQKGYSLNADTR VCEDVDECERPGICGPGQCYNTIGNYTCMCPVDYMQVNGGNNCMDIRKSYCYRNFYSYNE TCDGELTYNMTKKMCCCSYNIGRAWNKPCEQCPVPSTDAFAILCGSERPGYYIDITTGRV IDIDECREIQGVCENGVCINMIGSFRCECPIGFIYNDKLLICEDIDECQNGPVCQQNAAC LNLPGSFRCECKPGYRFTPTGQCQDRNECNENPGICNPGSCIDMLGSYRCHCPNGFKTTR DQSMCVDVDECERQPCGNGTCKNTVGSYNCLCYPGFQNSHNGDCIDVDECSTQRGMCRNG QCLNSLGSFLCVCNDGYELTQDGRLCTDINECAVNPGTCGAGTCVNLDGSYRCICPLGYY LHEETCEDIDECSLSPEMCTFGTCANNEGSFTCLCPDGFQVSASGRRCLDIRVNYCYTRF ENGHCQAPKPQNTSKAECCCTMMPGQGWGDPCEICPTDGEEGYPLLCPNVGYEQGKDDHP KDIDECLNDPCINGECINIDGAFRCECPMGYNLDISKVKCEDTNECAIGNPCGNGTCTNV VGGFECACDDGFEPGSMMTCEDINECSQNPLLCAFRCVNVVGSYECKCPTGYVLRDDKRM CKDQNECEDGIDDCASRGMTCKNLIGTYMCICPPGYMRQPGGDGCIDLNECTAKPGTCKN GRCENTVGSFRCRCDQGYVANPTQTECIDNREGFCFTEVLTTLCQMTSSNRNLVTKSECC CDGGRGWGTSCELCPLPGTTQYKKMCPLGPGYTTDGRDIDECRVMGNLCKNGQCLNTLGS YSCTCKTGYTTDISSTQCVDVDECIQAPKPCNFICKNTEGAYLCSCPRGYILQEDGKTCR DLDECSTKQHNCQFLCVNTIGGFTCKCPPGFTQHHTACIDNNECASDPNMCGSNGACQNT PGSFNCDCQRGFSLDPNGQSCEDMDECDGNHRCQHGCQNLVGGYRCSCPQGYLQHYQWNQ CVDENECQTSQICGGASCHNTLGSFRCLCPTGFNYEQTGAGCSDVNECSTSQNPCKFGCS NTDGGYLCGCPTGYFRAGQGHCVTGLGFTSDGSSAEPEGEADDNSLSHEACYECKINGYP KKGRKRRSTNSTQEDPQDNSQLTEEMVSLASVDIEDTLHIHLNISDLSNRDHILEFTPAL SALSDHVRYSIDYGNEEGYFKINQREGVSYLHLSKKKALLSGAYSLQISSVPTYRKKELA ELEDQHDKDYLTGQLGDILKMRVQIVLH NT seq 8727 nt NT seq  +upstreamnt  +downstreamnt atgccggacagtaagtgtggaggacggctgctgcagttggccgtggctctggtggctttg ctgtctctcgctgagcttggacactttgcagaggtggtggacaccgaggacagcgagccg acggccaagcagaccgactccagagccagcagggccaagaggaggggagggtcggacgtc ctcagaggacctaatgtgtgtggatcaaggaacaacgcttactgctgcccaggctggaag actctgactggaggaaaccagtgcattgttccgatctgccgaagttcatgtggagacggt ttctgctccagacccaacatgtgcacctgccccaccggccagatctccccagcctgtgga tccaagtcagtccagaactgtaacattcggtgtatgaacgggggaacatgtgctgaggac aactgccagtgtcagaaaggctacgtggggaaccactgtgggcaaccggtttgtgagaat ggctgccttaatggaggaaggtgtgtggcccccaacaaatgcgtgtgtacctacggcttc accggggctcagtgtgagagagattaccgcaccgggccgtgcttcgcctcggtgcacaac cagatgtgccagggccagctcacaggcattgtgtgcacaaagactttgtgctgcgccaca gtgggacgggcgtggggtcacccctgcgagatgtgccctgcccagcctcacccctgtcga agagggttcataccaaatcaccgctccggggcgtgccaagatgtggatgagtgccaggcc atccctggcctctgtcaaggaggaaactgtatcaacacagtgggatcctttgaatgtaaa tgccccgctgggcacaagttcaacgaggtctcacagaaatgtgatgatctggacgagtgt tcaaacatccaaggtctttgtggtgtaggtgaatgctctaatactgttggcagctacatc tgtaagtgtccccagggatattacacatctttggatggatccaagtgtatagattctcgt ggagggtactgctacgctagcgtgctgaatgggcgctgcgccaaccaaaactcgcagctg ttgaccaaaatgcagtgctgctgtgatagtggacgctgttggtctgacggatcctccccg gaaatgtgtccctttcgtggatcagaagagtaccagaaactgtgcatccagatacctgat gggaacaatggagtggttcctggtcgtgtcccagggagtcccgacctccctgccatctac ccacttccatatcctggtcaaaatcctggccagttacccctgtatcctggtcaaaatcct ggccagttacccctgtatcctggtcaaaatcctggccaggtacccgtgatcccaggacaa ttcccatttccaggacaactacctttacagcctcgaccaggatccgggattatcctcacg cagaacatcaccaacatgtgtcaggccttccgtaacctctgcctgaatggcaggtgcatc cccatgccgagcattggatatcgttgtgagtgcaacatgggcttcaggttggatggaaga ggagagtgcttggatgatgacgaatgtgagagaagcccatgtgcacacggagagtgtgtg aacaccccagggtcttacatctgtcagtgtcctgctggattccagactactgcaaccagg acagagtgcagagatctggatgagtgtgttgctaacggtcgcatctgcaataacggccgc tgtgtgaacactgtgggcagcttccattgtgtctgcaatgctggatttgagattacatct gacggcaaaaactgtcaagaccaggacgagtgtctgatcaggaacatgtgcctcaatgga ctgtgtatcaatgatgatggtagcttcaaatgcatctgcaaacctggattcttgcttgac ggcaatggacgcatgtgtgtagacattgatgagtgtgagactccaggcatgtgtatgaac ggccactgcatcaacacggagggctccttccgctgtgagtgtatggctgggatggcagtg ggcctggatggacgggtctgtgttgatacacatatgcgcagttcttgttatggtggctac atgcgagggcagtgtgttagaccgttatttggagctgttaccaagtcagagtgctgctgt gccagcatcgagtacgcctacggagagccctgccaaccctgcccaccagaaagctctgct gatttcctggctctgtgccccagtggccctggcatcagcggcgatggaagagatattaac gaatgtgccctcgaccctgatatctgccagaatggagtgtgtgagaatatgttgaggaca tacaaatgcacctgcaatgaaggctttgaaatagacctgacgggcaaaaactgtgtcgat attgatgagtgtctgatgaaccgtcagctgtgtgataacggtcagtgcaggaacacaccg ggcagtttcacctgccactgtcccaaaggattcgtctttgatcccgaaacagacgtctgc gaggatgtggatgagtgtctgtccaacccctgtattaacggagactgtaagaacagcctg gggtcctttgtgtgtttgtgttcaaccagcagttcactggacagcactgggatggagtgt atagagactactaagagcacctgctggcttaagatagtcaataatcgctgtgaggtcaac atcaacggggccacactaaagtcccactgctgcgccacactgggagaagcctggaacagc ccgtgtgccaaatgtgaaaaagatccattctgtggtaaaggccttgctagggtcaaagga aatatctgtgaagatgtggatgagtgtcgagtgtttcccggagtgtgtatcaatggaaag tgcatcaacacaccgggctccttcttctgccagtgccctccaggaatgactgtggatatc agcggcaggacgtgcattgacctgcgtatggagcactgttatctcacccatgaggacgag cgctgtgtggctcccatctctggtaagcagcgagtagacgcctgctgctgctccgtgggt gtagcctggggccctgagtgtgacgagtgtcccgagaaagggactccagaatacaaccag ctctgtcctcgtggaccaggcttctcgcacaggggcgacttcatcaacggcagacccttc ctcaaagatttaaatgaatgcagaatgataaacacgctgtgctcaaatggaaggtgtaga aacaccatcggcagtttccgttgtcgctgtgataacggctatgctctggactctgatgag aggaactgcactgacatcgacgagtgccgcatctctgtggacttgtgtgggcagggcagg tgtataaacacagccggagattttgaatgcgagtgcttcgaaggatacgaaagtggcttt atgatgatgaaaaactgcatggacatcgatgagtgtgagaggaaccctctgctgtgccgc ggtggtgagtgtctgaacacggagggcagcttccagtgtttgtgccccgatggacacgag atcgcccccgacgggtcagcctgtctagatatcaatgaatgtgacttgagtgacaggctg tgcaggaacggacaatgtgtcaatatgatcggccgctaccagtgcacctgtgacactgga tacaaatccaccgagaacagagtggagtgtgttgacatcgacgagtgtacgattgagaat ggtggctgtgagacgttctgcaccaactcagaggggagctatgagtgcagctgccacagt ggatacgccctgatgcccgatctgagaacctgcactgatattgatgagtgtgaggagagc ccagacatctgtgatggaggccagtgtaccaacaccccagggacgtaccagtgtctgtgc tatgacgggttcatgtcatctgaggatatgaagacctgcctggatgtggatgagtgtgag ctgaatccagacatctgcctgagtgggaactgtgagaacgcgaagggatccttcatctgc cactgtgacccgggatactcggtccgcaagggaaccacaggctgcacagacgtcaatgag tgtgagatcggagcccataactgtgacagacaagctacctgcaccaacacagctggcggc ttcaaatgccactgtgctccaggatggattggtaatggcgtcaaatgtacagacctggac gagtgctccaacgggacacacatgtgcaacaacaacgctgaatgtctcaacaccatgggc tcatatcgctgtgcatgcaaggagggattctctggagatggattctactgctcagacagt gatgagtgtgcagacaacggcaacctgtgtgagagcggccactgtctgaacctccccgga ggataccgctgtgaatgtgacatgggcttcatacccactcctgaccagaagtcctgcgag gacatagatgaatgtacctttgctgacatctgtgtcaatggacgctgccagaatattcca ggactgttcagatgtgattgtagtcttggctatgaactggacaggagtggaggcaactgc acagacatcaatgaatgtgcagacccgaccatctgcattaatggagtctgtgtcaacatc cctggaagttacctctgtaactgtcctgcagactttgagctcaaccccacccgggtgggc tgtgtagacactcgttctggaagctgctacctggatgtgcgttcccgtggagatgcttca gagagcttggactgctccaatgagattggagttggtgtttccaaagcgtcctgctgctgc tctctgggtcagggctgggggaacccgtgtgaatcctgccccgctctcaactcaactgag tacaagacgctgtgtcctggaggagaaggcttcagaccaaaccccatcactgtcatcttg gaagacatcaatgagtgccaggagctgccaggcttgtgccagggaggacagtgcatcaac acctttggcagcttccagtgcgagtgccagaaaggatacagtctcaacgctgacaccaga gtctgtgaagatgttgatgagtgtgaacgaccaggcatctgcggcccaggccagtgctac aacaccatcgggaactatacctgtatgtgccctgtggactacatgcaggtcaatggaggg aacaactgcatggacataaggaagagctactgctacaggaacttttactcttacaacgaa acttgtgatggagagctgacctataacatgaccaaaaagatgtgctgctgctcctacaac attggccgcgcatggaataaaccctgtgaacagtgtcccgtgcccagtaccgatgcgttt gcgatcctgtgcggcagtgagagaccaggatattacatcgacatcaccactggacgggtc attgatattgatgagtgcagggagatccaaggagtgtgtgagaacggcgtgtgcatcaac atgatcggcagcttcaggtgtgagtgccccatcggcttcatctacaacgacaagctgttg atttgtgaagatatcgatgagtgtcagaacgggccggtgtgccagcagaacgcggcctgc ctgaacctccccggaagtttccgctgcgagtgtaaacccggatatcgcttcacccccact gggcaatgtcaagaccgtaatgaatgcaatgagaaccctggtatatgcaatcctggtagt tgcattgacatgctggggagttaccgctgccactgccccaacggcttcaaaacaacacgg gaccagtccatgtgtgttgacgtggacgaatgtgagaggcagccctgtggcaacgggacc tgcaaaaacacggtgggctcctacaactgcctgtgctaccccggcttccagaactcacac aacggggactgcatagatgtggatgagtgttccacgcagaggggcatgtgtagaaacggg cagtgtctgaactccttgggctcgttcctctgtgtgtgcaacgacggctatgagctcact caagacggcagactctgtacagatatcaatgaatgtgcagtgaatccaggcacatgcggt gctggaacttgtgtgaatctggatggctcttacaggtgtatctgcccattgggctactat ctccatgaggagacctgtgaagatattgatgagtgctccctgtcgcccgagatgtgtaca tttggaacctgcgccaacaatgaaggaagcttcacctgcttgtgtccagacggcttccag gtctctgcctccggacgcagatgtttagatatccgtgtgaactactgctacaccaggttt gaaaatggccactgccaggctccaaagcctcagaacacttccaaggcggagtgctgctgc actatgatgccaggtcaaggctggggagacccctgtgaaatctgccccaccgacggagag gagggttatcctcttctctgtcccaatgtgggatacgaacaggggaaagatgaccaccca aaagatattgatgaatgcctcaatgatccctgcatcaatggcgagtgcatcaacatagac ggcgctttccgctgcgagtgcccaatgggatacaatctggacatcagtaaagtcaagtgt gaagacactaatgagtgtgccattggcaatccatgtggaaacggcacatgcactaatgtt gttggtggctttgagtgtgcgtgtgatgacggctttgagcctgggtcaatgatgacctgt gaagacatcaacgagtgctcccagaatcctctgctgtgtgccttccgctgcgttaacgtg gtgggctcgtacgagtgtaaatgtcccacaggctacgtgctgcgcgatgacaagaggatg tgtaaagatcagaatgagtgtgaggacggtatagatgactgtgccagcagaggcatgacc tgcaagaacctgattggtacatacatgtgcatctgtccccctggatacatgcggcagccc ggcggagatggttgcattgatctgaatgagtgtacagccaaaccaggtacctgtaagaat ggccgttgtgagaacacagtgggaagcttccgctgcagatgtgaccaaggatacgtcgct aaccccacacagactgaatgtatcgataaccgagaaggcttctgcttcactgaggttttg accaccctgtgtcagatgacttctagcaacaggaacttggtgaccaagtccgagtgttgc tgtgacggaggcagaggctggggcacaagctgtgagctctgccccctgcccgggaccact cagtacaagaagatgtgtcctctgggacccgggtacaccaccgatggcagagatattgat gagtgtcgtgtgatgggcaacttgtgcaagaacggtcagtgtctcaacactctgggctcc tatagctgcacctgcaaaaccggctacactactgacatcagcagcacacagtgtgtggat gtggatgaatgcatacaagcaccaaagccttgtaatttcatctgtaagaacacagaggga gcatacctctgttcctgcccccgtggatacatcctacaggaagatggaaagacctgcaga gatctggatgagtgttcgacaaagcagcataactgtcagttcttgtgtgttaacactatc ggagggtttacctgcaaatgtcctcctggcttcacccagcatcatacagcctgcatagac aacaatgaatgtgcatccgaccccaacatgtgtggctccaacggggcctgccagaacact ccagggagcttcaactgtgattgccagcggggattctcgttagatcccaatggacaaagc tgtgaagatatggatgagtgtgatggaaaccacaggtgtcagcatggctgtcagaacctg gtgggtggatacaggtgcagctgtcctcaaggctacctgcagcactaccagtggaaccag tgtgtagatgagaacgagtgtcagaccagccagatctgcggcggagcgtcatgccacaac accctggggagcttccgctgcctctgccccaccggctttaactacgagcagacaggcgcg ggctgctcagacgtcaacgagtgctccaccagccaaaacccctgcaagttcggctgctcc aacacggacgggggctacctctgtggatgtcccactgggtacttccgtgcaggacaaggg cactgtgtcacaggtctgggcttcactagtgacggctccagtgctgaaccggaaggtgag gcagatgataactctctgtcccacgaggcctgctatgaatgtaagatcaacggatatccc aagaagggacgcaaacgccgcagcaccaactcgacacaggaggatcctcaggacaactcg cagctgactgaggagatggtgagcctggccagtgtggacatcgaggacacgctgcacatc cacctgaacatcagcgacctgagcaaccgcgaccacatcctggagttcaccccggcctta tccgcgctcagtgaccatgtgcgctacagcattgactacggaaatgaagaaggctacttc aagataaatcagagagagggcgttagctacctgcatctgagcaagaaaaaggccctgctc tcaggggcatactcccttcagatcagcagcgtgcccacgtacaggaagaaggagctggct gagctggaggatcaacacgataaagactacctcacaggacagctgggagacatactgaag atgagggtgcagatcgtccttcattaa

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