Trematomus bernacchii (emerald rockcod): 117471849
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Entry
117471849 CDS
T09643
Symbol
lgr4
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 4
KO
K04309
leucine-rich repeat-containing G protein-coupled receptor 4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117471849 (lgr4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
tben04030
]
117471849 (lgr4)
G protein-coupled receptors [BR:
tben04030
]
Rhodopsin family
Others
R-spondin
117471849 (lgr4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
7tm_1
LRR_EndoS
LRR_LRWD1
LRR_R13L1-DRL21
DHU1_N
Ac45-VOA1_TM
LRRNT
Motif
Other DBs
NCBI-GeneID:
117471849
NCBI-ProteinID:
XP_033972987
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MRVDLFWICLWCFLRPGATGQGQSTAVCSPSCSCDEDGGADCSGRGLTTVPTGLSTFTYY
LDLSMNNITELPAFVFKNLPYLEELRLAGNDLSFIHPDALSGLHQLKVLMLQNNQLKTVP
SAALKNLQSLQSLRLDANHILTVPEDSFEGLQQLRHLWLDDNNLTEVPVVSLRHQENLQA
LTLALNRITYIPDNAFANLTSLVVLHLHNNRIKQIGDNCFAGLVNLETLDLNFNNLMVFP
KAIEALPKLKELGFHSNDIAAIPEGAFHNNPLLRTIHLYDNPLSSVGASAFQNLSDLHSL
MLRGASMMQDFPILTSTNNLESLTLSGTKISSIPANLCEDLKLLQTLDLSYNEIKELPSL
QSCVRLQEISFQHNHIDQIDRDTFQGLSALRLLDLSRNDIRVIHRDAFLSLATLTNLDLS
MNSLTVIPTTGLSALSQLKLSGNPEMKNVLKAKNLPKLRSISVPYAYQCCAFVGCDSMSS
SSEENDLKKSSGGEDVERMSMIMHCSPSPGAFKPCEHLLGNWMIRLTVWFICLVSLVFNS
LVLVATFAPTHHASGHSPSLSPARLLMGLLALANLLTGLYVGVLTVLDVATWGSFAEFGV
WWEMGPGCQVTGAMAVFSSEWAVLLLSLAAVERSVAVRTILGKVLMSPRRGGSRRGCWRG
DRRFSLAAGLLGLLAAAGACLPLLTSGDPSSSPLCLPFAGGESPALSVTVVLVLLNALAY
LFTAAVYTQLYCHLGRVELADPEQTGALRHVAWLIFTNCIFFCPVAAFSFAPLLTGSTAG
GPEIAKSVTLIFFPLPACLNPVLYVFFSPAFREDWLRLRGRGGSSREVKAGAESHGDDGG
GGSEITDGGSSTHLGFDCGVYSQLCGETVVCEQCEAALHARTCSSPSSSTVCRHFMKSHS
CPTLLAGAAVCQRAEGFWADSGTPSAQSEYADEGDSFVSDSSEQVQACGRACFCQSRGLP
LVHYSYNIPRVKD
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtggacttgttttggatatgtttgtggtgtttccttcgccctggtgccaccggt
caaggacagtcgacggccgtgtgctcgccctcatgcagctgcgatgaagatgggggtgca
gactgctccgggagggggctgaccaccgtcccgaccgggctcagtactttcacctactac
cttgacctgagcatgaacaacatcacagagcttccagcatttgtgttcaagaacctcccc
tatctggaagaactacgacttgccgggaatgacctgtcattcatccaccctgatgccctg
tctggactgcatcagctcaaagtcctgatgctccagaataatcagctgaagactgtgccc
agtgctgccctgaagaaccttcaatctcttcagtctcttcgcctggatgccaaccacatc
ctcacggtaccagaagacagttttgaaggccttcagcagctgcgccacctttggttggat
gacaacaacctgacggaggttcctgttgtttctctgaggcaccaggagaacctccaggct
ctgacgctggcgctgaaccgcatcacgtacataccagacaacgccttcgccaacctcacc
agtttagttgtgctacatcttcataacaacagaattaagcagataggagacaactgtttt
gccggtcttgtgaacctggagacgctagatctgaacttcaacaacctgatggtttttcca
aaagctatagaggccctgcccaaactgaaggaactcgggtttcacagcaacgatattgct
gccatacctgaaggggccttccataacaaccccctgctgcgcaccatacacctttacgac
aaccctctgtcctcggtgggcgcctcggctttccagaatctgtccgacctgcactccctg
atgctccgcggggccagcatgatgcaggacttccccatccttacgtcgactaataacctt
gagagtctgaccctgtcaggaaccaagatatcttccatccctgctaatctttgtgaggac
ctcaagctgctccagacgctagacttgtcctacaatgagatcaaggagctgccttccttg
cagagctgcgtcaggctgcaggagataagctttcagcacaaccacattgaccaaattgac
agggacactttccaaggtctctctgctctccgtttgctagacctgagcagaaatgatatc
cgagtaatccacagagatgctttcctctccctcgctacactcaccaacctagatctgagt
atgaactctctgactgtgattcctaccactggactgagtgcgctcagtcagttgaaactc
tcaggaaacccggaaatgaaaaatgtgctgaaagcaaaaaacctgccaaagctgaggtcg
atctctgtcccttatgcctaccagtgctgtgcatttgtcggatgtgactccatgtcgagt
tcttctgaggaaaatgacctaaagaaatcatcaggcggggaggatgtggaaagaatgtca
atgattatgcattgctctccttctccaggagccttcaagccttgtgagcacctgctgggt
aactggatgatccgcctgacggtgtggttcatctgcctggtgtcgctggtgttcaacagc
ctggtgctggtggccaccttcgcccccacccaccacgcttcgggccactccccctccctc
tcccccgcccggctgctgatggggctgctggccctggccaacctgctcacaggtctgtac
gtcggcgtgctgaccgtgctcgacgtggccacatggggctcgtttgctgagttcggggta
tggtgggagatggggcccggctgtcaggtcacaggagccatggccgtcttctcctcggag
tgggcggtgctgttactctcgttggcagccgtggagcgcagcgtggccgtgcggacgatt
ctcgggaaggtgttgatgtcacccaggaggggcggcagccggcgggggtgctggagaggg
gatcggcgcttcagtcttgctgcgggcctcctggggctgctggctgctgccggagcctgc
ctgcctctcctgacctccggggacccctcctcctctccgctctgcctgcccttcgccggc
ggagagagtccagctctgagtgtcacagtggttctggtgctgctcaacgccctggcttac
ctgttcactgcagcggtgtacacccagctgtactgccacctgggccgggtggagctggca
gacccggagcagacgggcgccctgcgacacgtagcatggctcatcttcaccaactgcatc
ttcttctgtcccgtggcagctttctccttcgcccctctcttgactggctctacagctggc
ggtccagagatcgccaagtccgtcaccctcattttcttccctctgccggcgtgtctgaac
ccggtgctgtacgtgttcttcagcccggccttcagggaggactggctgaggctacggggt
cgcggaggatcgagcagggaagtgaaggctggggccgagagtcacggagatgacgggggc
ggaggatcggagatcacggatggcggctcctccacccacctgggctttgactgtggggtg
tactcgcagctctgtggagagacagttgtgtgcgagcagtgtgaggcggcgctgcatgcc
aggacctgctcgtccccgtcgtcctccacagtgtgcagacactttatgaagtctcacagc
tgtcccaccctgctggcgggagctgcagtgtgccagcgcgctgaggggttttgggcagac
agcggcaccccctccgctcagtctgagtacgcagacgagggggactcgttcgtgtcggac
agctctgagcaggttcaggcatgcggcagagcgtgtttctgtcagagcagaggcctccct
ctggtacactactcatacaacatacctcgagtcaaggactaa
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