Trematomus bernacchii (emerald rockcod): 117472809
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Entry
117472809 CDS
T09643
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04010
MAPK signaling pathway
tben04137
Mitophagy - animal
tben04141
Protein processing in endoplasmic reticulum
tben04210
Apoptosis
tben04217
Necroptosis
tben04621
NOD-like receptor signaling pathway
tben04622
RIG-I-like receptor signaling pathway
tben04920
Adipocytokine signaling pathway
tben05132
Salmonella infection
tben05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117472809
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117472809
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117472809
09143 Cell growth and death
04210 Apoptosis
117472809
04217 Necroptosis
117472809
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117472809
04622 RIG-I-like receptor signaling pathway
117472809
09152 Endocrine system
04920 Adipocytokine signaling pathway
117472809
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117472809
09171 Infectious disease: bacterial
05132 Salmonella infection
117472809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117472809
04121 Ubiquitin system [BR:
tben04121
]
117472809
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117472809
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117472809
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
117472809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-RING_4
zf-C3HC4_2
Sina_ZnF
MATH
zf-RING_6
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
DUF5798
zf_C2HC_14
Motif
Other DBs
NCBI-GeneID:
117472809
NCBI-ProteinID:
XP_033974111
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MAAQEPSPPSTLEGNKPGFPKKILANNLDDEHLCNSCQKILRRPLQAQCGHRFCSFCFNK
IVSSGPQKCSACIKEELFEEPTSILKEGGAFPDNAARREVEALAAVCPNEGCTWTGTIKE
FEACHEGNCDFMIILCPSCKELMRANEQERHNERECPEKTLNCKYCKEPFLLKNIKAHDE
ICPKYPLICEGCAKKKIPRGKYVDHIKFCSKFKAPCRFHVVGCDTSVEKEKIHDHERQCS
YEHLNMLLHFIMGIKLQLQSKKAKVVELTRRCQELVLKVSTFENIVSVLNREMERSCTIV
EAYNRQHRLDQDKIEILNNKVRQLERTVSLWDLSIVEMEGKMREMSAATYDSIFVWKISD
FTKKRQDAVGGRAPAMFSPAFYTSKYGYKMRLRIYLNGDGTGRGTHLSLFFVVMRGNSDP
LLKWPFNQKVTLMLLDQNSREHIIDAFRPDVSSSSFQRPVSGMNIASGCPLFCPLSKLDS
KNSYIRDDTIFIKAIVDLTGL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacaggagccgtctccaccatccaccctggaaggcaacaaaccgggctttcca
aagaaaatcctagctaacaacctggacgacgagcatttgtgcaattcgtgccagaaaatc
ctgaggaggcccctgcaagctcaatgtggtcaccgcttttgttcgttctgcttcaacaaa
atcgtgagttctggacctcagaaatgcagcgcttgcatcaaagaagaattgtttgaagag
cccacctccattctcaaggaaggcggtgcctttcctgacaacgcagcgcggagagaggtt
gaggccttggcagctgtctgtcccaacgaaggatgcacgtggacgggaactatcaaagag
tttgaggcctgccatgagggaaactgtgacttcatgatcatcctgtgtccctcctgcaaa
gagctgatgagagccaacgagcaggagcggcacaacgagagagaatgtcccgagaagacg
ctcaactgcaaatactgcaaagagcccttcctgttaaagaacatcaaggctcatgatgag
atctgtccaaagtacccgctgatctgtgaaggctgtgcaaagaaaaagatccccagagga
aagtatgtggaccatattaaattctgcagtaaatttaaagcaccatgccgattccatgtt
gttggctgcgatacgtctgtggagaaagagaagatccatgaccacgagaggcagtgctcg
tacgaacacctcaacatgctcctgcatttcatcatgggcatcaagctgcagctgcagagc
aagaaggccaaggtggtggagctgacccgccgctgccaggagctggtgctcaaagtcagc
acgttcgagaacatcgtgagcgtcctcaaccgagagatggagcgctcctgcaccatcgtg
gaggcctacaaccgccagcacagactggaccaggacaagatcgagatcctcaacaacaag
gtccgtcagctggagaggacggtgagtctgtgggacctgtccatcgtggagatggagggg
aagatgagggagatgtctgcggccacatacgacagcatctttgtgtggaagatctccgac
ttcaccaagaagaggcaggacgccgtgggcggccgcgcccccgccatgttctcccccgct
ttttataccagtaaatacggctacaagatgcgcctgcggatctacctgaacggcgacggg
acgggtcgggggacgcacctctcactcttcttcgtggtgatgagaggaaacagtgaccca
ctcctcaagtggcctttcaaccagaaggtcaccctcatgctgctggaccagaacagcagg
gagcacatcatcgatgccttccggcccgacgtctcctcctcgtccttccagaggcccgtc
agcggtatgaacatcgccagcggctgcccgctcttctgcccactctccaagctggactcc
aagaactcctacatacgtgacgacaccatcttcatcaaggccatcgtcgacctcactggg
ctctag
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