KEGG   Trematomus bernacchii (emerald rockcod): 117473122
Entry
117473122         CDS       T09643                                 
Symbol
ercc6l2
Name
(RefSeq) DNA excision repair protein ERCC-6-like 2
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tben03400]
    117473122 (ercc6l2)
DNA repair and recombination proteins [BR:tben03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    117473122 (ercc6l2)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD VIGSSK ERCC3_RAD25_C HDA2-3
Other DBs
NCBI-GeneID: 117473122
NCBI-ProteinID: XP_033974505
LinkDB
Position
Unknown
AA seq 1589 aa
MASSSAVVKATWREGDSCLAPDPRDGTLREATIKRLTSISNTNDTTAWVQFTHLEKDAEE
KEEEEAVPVSKLMRPELNHFLQEKPMFPCIAADTKLCVPLELSDVNGDSVPYTINRYLRD
YQREGIRFIYKNYIGSRGCILGDDMGLGKTVQVIGFLAAVLHKTGTWEDIEKNRPQFLLS
QMPSKQSKPNKVFLIVAPLSVLYNWKDELDTWGHFQCVVVHGLRKEEELARIKKGRIEIA
LTTYETLRLCLDQFNNIDWSAVVVDEAHKLKNPNSQITQAMKDLKCKIRVGLTGTILQNN
LEELWCVMDWAIPGCLGNLGNFKNNFSDPIEQGQRHSATKRALATARKTVRALVRKISHL
FLRRTKALIKEQLPKKDDRVVYCSLTDFQQTVYQTVLDSEDVTLILKSSEKCDCQSGRTR
GRCCYKTNSEGVEIKSLYFSYLAILRKIANHAALLQSTAGTSKKQEKYVGRICAKVFQKF
PDFVQRCKDEAFEALSDPLYSGKMMVLQKLMKHYLQRRDKILIFSLSTKLLDVLESYCMA
EGLDYIRLDGTTKAKERVQIVKEFNISPHINLCLVSTMAGGLGLNFVGANVVVLFDPTWN
PANDLQAIDRAYRIGQCRDVTVLRLISLGTVEEVIYLRQIYKQQLQSSVVGKESARRYFE
AVQGHGVHKGELFGIKNLFRLQTLGSCLTREILEREGQVEAGVMTSSTYTAEEKEEGTEG
VSKPGDSPPADDPVPNNEPAQENRGASKVQKGVLDFSSGSEEDDEEQGLKRKGSKPGAAD
GNSAAAGPGRVSLLQHGFSRLLERVKGKPELAEGDSSPGIEESPSEEETVDQNMEGASSG
ICKSSDAGNASVGPPKLGTKTWGSDIEDSENGDSGKEERVSLFKQSDDNVRKRWGLKGGT
NKNITVDEESDGNPSPDKKKPNKLKTSVPKVRRFKGYSDESEDLDIEAKTCPKRSTLNSH
GRGSCRSSVRDKARSKYTKDIETFTSSEEENTPVKKGRSPGCPSTSPQIERSRFELTKDG
QRAATTRTERRAGMPKAVSFTNLKCQTSPASKGKDITIDSVLGGVHEVLYTHSNQRVVGG
SKAEERMSRAAVRDVFERKMYSQLPANHLLGTQESLSSSPPDSPPCPSAVRLERPSVDHP
VSFANKSVHQTKNTTFIIGETPQAICRQQLEEMAEQLKFPSVHQFALEILRKNSTQRLAW
LRQYYTSLNNPDLDKTVTNNFPESDSAQTSFSTTTSTTSTRTSPKSQTHTRTPQKDVPKA
KRKPKYSQNNPEPKMMPETQQNNVSVQQKKSRRPQNDVPVPQTKHRNLQNNVLPPLKKQN
IPHKNALEPLSDVPSLESDEQEETVCSARGHKRTKMNSVSGSGAFGGLGLDQASSSGLTS
GEVAAFPTSTNRDIPSSQDLRHGSSTTLSKPTAKEGQKLSFRSSETLQGQRTNPLTSSPP
EQATSSSSHRSLLKDLIGDTSILDDLLKPKPKGVKQSPKTAPALSNVSVDACLTTPSSSK
ITLNTDSGAVIDSLSSPNKPPTHQVVSKGSRKDFWDILNEGNEESINRLTDPAEVQRVCI
NTRIAARGRSGKEERESLWKTNDKFLWKK
NT seq 4770 nt   +upstreamnt  +downstreamnt
atggcttcatcttctgcagttgtgaaagcaacatggcgtgagggggacagttgtttggct
cctgacccgagagatggcaccctgcgagaggccacaattaagagactgacctccatctct
aatactaatgatactacagcatgggtgcaattcactcaccttgaaaaagatgcagaagaa
aaagaagaggaggaagctgtacctgtctcaaaactcatgagaccagagttgaatcacttc
ctccaggagaaacctatgtttccctgcatcgctgcagacaccaagctttgtgtcccctta
gagttgagtgatgttaatggagatagtgtcccctacaccatcaacagatacctgagagat
taccagagagaaggtatcaggttcatttacaaaaactacatcggttccagaggttgtatc
ctgggggatgacatgggcttgggaaaaaccgtacaggtcattggtttccttgctgctgta
ttacacaaaacaggcacatgggaggacatcgagaaaaacaggcctcagtttctgctgagt
cagatgccttccaagcaaagtaaacccaacaaagtattcctcattgtggccccgctctca
gtgctttataactggaaagatgaactggacacatggggtcacttccaatgtgtggtggtc
cacgggctgaggaaagaggaggagctggctcgcatcaagaagggacgaattgagatcgcg
cttactacctacgagactctgcgcctttgtcttgatcagtttaataatatagactggtct
gctgtggttgtggatgaggcccacaagctaaaaaatccaaactctcagatcactcaggcc
atgaaggatctgaaatgcaagatcagagttggcctcactggcaccatcttacagaacaac
cttgaggagctgtggtgcgtcatggactgggccatacctggttgtcttggcaacttagga
aatttcaagaacaacttttcggatccgatagagcaagggcagaggcacagcgcaaccaaa
cgtgccttagctaccgcaaggaagactgtcagagctctggtgaggaagatctcccatttg
ttcctcagaagaactaaagctctcatcaaggaacaactgcctaagaaggatgacagggtg
gtgtattgctccctgacagactttcagcagactgtgtatcagacggtgttggactctgaa
gatgtgacgttaattctgaagtcttcagagaaatgtgactgtcaaagtggacgcacccgc
ggacgctgctgctataaaacaaattcagaaggtgtggaaattaagagtctatactttagt
tacttggcaatattgaggaagattgcaaaccatgcagcactgcttcagtctaccgcagga
accagtaagaaacaggaaaagtatgtggggcgcatatgtgcaaaggtattccaaaagttc
ccagactttgtgcagagatgcaaagacgaagcatttgaggccttgtcagacccgctgtac
agtgggaaaatgatggttttgcagaagctgatgaagcattacttgcaaaggagagataaa
atacttattttttctctctcaaccaagctgttagatgtgctggagagctactgcatggcc
gaggggctcgactacatcaggctggacggaaccaccaaagccaaagagagagtccagatt
gtcaaagagttcaacatctctcctcacatcaacctctgcctggtttccaccatggcgggt
ggtcttggtctgaacttcgtaggggccaatgtggttgtactctttgaccctacttggaac
ccagccaatgacctccaagctattgacagggcatatcgaattggccagtgcagagatgtg
actgttcttaggctgatctcattgggcaccgtagaagaggttatctacctcagacaaatt
tacaaacagcaacttcagtcctccgttgtcggcaaggagagtgcgcggcggtactttgag
gcagtgcaggggcatggtgtccataagggggagctgtttgggatcaaaaacctcttcagg
ctgcagaccctagggtcatgcctcacccgcgagatactagagcgagaaggacaagttgag
gccggcgtaatgacaagcagcacatacacggctgaagagaaggaggaggggacggaggga
gttagcaaacctggcgattccccacctgcagatgaccctgtaccgaataatgaaccagcc
caggagaacagaggtgcatcaaaggtccaaaaaggggtgctggacttcagcagtggaagt
gaagaggatgatgaagaacagggtcttaagagaaaggggtcaaagcccggtgcagcggat
ggcaacagtgctgctgctggtcctggtcgagttagtctccttcagcacggtttctccagg
ctcctcgaaagggtcaaagggaaaccagagttagcagaaggggacagtagtccaggtatc
gaagaaagcccctctgaggaagagactgtggatcaaaatatggagggtgcctcctctggt
atttgcaaaagctctgatgcaggaaatgcatcagtcggtccccctaaattggggacgaaa
acctggggttcagacatagaagacagtgagaatggagatagtggcaaagaagagagggtc
tcattgtttaaacagagtgatgataatgtaaggaagagatggggcctgaaaggggggaca
aataaaaacattactgttgatgaggagagtgatggaaatccctcacctgacaaaaagaaa
cctaacaagctcaaaacttcagttccaaaagtgcgccgctttaagggttactcagatgaa
tcagaggatttggacatagaggcaaagacctgtcccaagaggagcactttaaattcacat
ggtagaggaagttgcagaagtagtgttcgggacaaggccagatccaaatacacaaaggac
atagagacattcacatcttcagaagaggaaaacactcctgttaagaaagggagatctcca
ggatgtccctcaacatctccacaaatagaaaggtccaggtttgagttgacaaaagatggg
caaagagctgcaaccaccaggacagagagacgagcaggcatgcccaaagctgtttcattt
acgaatctgaaatgtcagacatccccggcatccaaaggaaaggatataactattgacagt
gtgctaggtggtgtacacgaggtgttatacacccactctaaccagcgcgttgtgggcggg
agcaaagcagaggagcggatgagtcgagccgcagtacgagacgtgtttgagcgcaagatg
tactctcagctcccggccaatcaccttctaggcacacaggagagtctgtcatcgagcccg
ccagacagtccgccctgcccctctgctgtcagactggagaggcccagtgtggaccatcca
gtcagctttgccaacaagagtgtgcaccaaaccaaaaacacgaccttcatcattggagag
actcctcaagccatatgcaggcagcagctcgaggaaatggcagaacagttgaagtttccc
tcagtccatcagtttgcacttgagattctgaggaaaaactcgacccagagactggcgtgg
ctacgacaatattacacatcactaaacaaccctgaccttgacaaaacggtgacaaacaat
ttcccagaatctgattcagcacagacctccttttcaaccactacctccacaacatctacc
agaacatccccaaaatctcaaacacatacccgaaccccacaaaaggatgttccaaaagcc
aaaaggaagccgaaatactctcagaataatcctgaacctaaaatgatgcctgaaacccaa
caaaacaatgtttctgtgcagcagaaaaagtctagacgcccacaaaatgatgttcctgtt
ccccagacaaagcatagaaacctgcaaaataatgttctaccgccactaaaaaagcaaaat
atcccacacaagaatgccctagaacctctaagtgatgttccaagccttgagtcagacgag
caggaggagacggtctgcagtgccagaggacataagaggacaaagatgaatagtgtttct
ggttctggagccttcggtggtcttggcttggatcaggccagcagcagtggtctgacatct
ggggaggttgctgctttcccgacaagcaccaacagagatattccttcttctcaggacctc
cgccatggcagctccaccacattatccaaacccacagcaaaggaagggcagaaactgtct
ttcaggagcagtgaaactcttcaaggccagagaacaaatcctctgacctcttctccccct
gagcaggccacatcttcttccagtcatcgttccctccttaaagatctgataggagacacc
tcaattctggatgacctgctaaaacccaaacccaagggagtcaaacagagcccgaagaca
gctcctgcactgtccaacgtgtcagtggacgcatgtcttaccacgccttcttcatccaaa
atcactcttaatactgattctggtgcagtcatagactcgctgtcctctccaaacaagccc
cctacacatcaggtggtttcaaagggcagtcgcaaagatttttgggacatcctgaatgaa
ggtaatgaggagagcatcaacaggttaacagacccggcagaagtacagagggtttgcatc
aacactcgtattgcagctagaggtaggtcaggaaaagaggagagggagagtctctggaag
actaatgacaagttcctgtggaagaaatga

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