Trematomus bernacchii (emerald rockcod): 117473218
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Entry
117473218 CDS
T09643
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00310
Lysine degradation
tben01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117473218 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117473218 (prdm6)
03036 Chromosome and associated proteins [BR:
tben03036
]
117473218 (prdm6)
Enzymes [BR:
tben01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
117473218 (prdm6)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
117473218 (prdm6)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117473218 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_jaz
zf-C2H2_11
Zf-C2H2_ZNF451_C
zf-C2H2_15
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
117473218
NCBI-ProteinID:
XP_033974627
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MLKPGEPSGSAFLKVDPSYLQHWQQLFPQAQLKAPLAPLPPPDRLSMPMDSLRQSRLHSH
LLASSHCTSSSSSTASSTSSSSAAGAALTPSSSISISNSAGISQLPVPQQIALFGQALAP
VCGGPGGGGGDLMMVVPPENRQGHNPMAGLLHQAKELSCGGVGVVSSSVKSSCGGEEGGK
GASARFKLTSEELDYYLYGQQRMEIIPLSNHTGEVNNRCDMCADNRNGECPMHGPLHSLR
RLVGTSSTPAPVTMPDVPDWLRDLPREVCLCTSTVPGLGYGICASQRIPQGTWIGPFQGV
PLLLDKLHSGAVRNSRHLWEIYDAEGTLQHFIDGNDPSKSSWMRYIRCARHCGEQNMMVV
QYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCVAQDENLNVPATVVEAMTRQES
LQSFSKNGKPSSSSSSSSSIPSTAHMRSMVFPHSPCPRNFSLLDKVGVGLSSDSSFGQLG
LKNQRVLASPTSTSQLSSDFSDWHLWKCGQCFKTFTQRILLQMHVCPQNPDRPYQCGHCS
QSFSQPSDLRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCDRSFT
QATQLSRHQRLPNECKPVNESSESIEVD
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagccaggtgagcccagcggctcggccttcctgaaggtggacccgtcctacctg
cagcactggcagcagctcttccctcaggcgcagctgaaggctcctctggcccccctgcct
ccacctgaccgcctctccatgcccatggacagcctgcgccagtcccgcctgcacagccac
ctcctggcctcttcgcactgcacctcctcttcttcttctacggcctcctcaacgtcttcg
tcttcagcagctggagcagctctcaccccgtcctcctccatctccatctccaactcggcg
gggatctcccagctacccgtcccccagcagatcgcactctttgggcaggcgttggccccg
gtgtgtggaggaccaggaggaggaggaggagacctcatgatggtggtgcccccggagaac
cggcagggtcacaatccgatggcggggcttctccatcaggccaaagagctgagctgcggg
ggggttggggtggtgtcatccagtgtgaagagcagctgtggaggagaggagggcggaaaa
ggagcgtcggccaggttcaagctcacgtcagaggagctggactactacctgtacggacag
cagaggatggagatcatccctctgagcaaccacacaggagaggtcaacaaccgttgtgac
atgtgtgcagacaacaggaacggcgagtgtccgatgcacggacccctccactctctgcgg
cgcctcgtcggcaccagcagcacgccggctcccgtcacgatgcccgacgtccctgattgg
ctcagagacctgcccagagaggtgtgtctgtgcaccagtacagttcccgggctgggttac
gggatctgcgcgtctcagaggatccctcaggggacctggatcggccccttccagggagtc
cccctgctgctggacaaactgcactctggagccgtcaggaacagcagacacctgtgggag
atctacgatgcagaagggacgttacagcactttattgatggtaatgatcccagtaagtcc
agctggatgaggtatatccgctgtgcccggcactgtggggagcagaacatgatggtggtc
cagtacaggtcctgtatcttctaccgagcgtgtatggatatccccagaggaacagagctg
ctggtttggtacaatgactcctacacttccttcttcggaatccccctgcagtgcgtcgct
caggatgaaaacttaaacgtcccagccacagtggtagaagcgatgaccaggcaggagtcc
cttcaatccttcagcaagaacggcaaaccttcctcctcctcgtcttcctcttcgtccatc
ccctccaccgcacacatgcgctccatggtcttcccccattccccctgtccaaggaatttc
tccctgttagacaaggttggggttgggctttcctcggactccagtttcggccagttgggg
ttaaagaaccagcgagtcctggcaagcccgacctccaccagccagctgagcagtgacttc
agcgactggcacctgtggaagtgtggccagtgcttcaaaaccttcactcagaggatcctg
ctgcagatgcacgtgtgtccgcagaatccagacagaccgtaccagtgtggccactgctcc
cagtccttctctcagccatcagatttgaggaaccacgtggtgacacactcaagcgaccga
cccttcaaatgtggatactgcggtcgtgcgttcgctggcgccacaacgctcaacaaccac
atccgcacgcacaccggggagaagccgttcaagtgcgagcgttgcgaccgcagcttcaca
caggccactcagctcagccgccaccagcgactccccaacgagtgcaaacctgtgaatgag
agcagcgagtccatcgaggtggactaa
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