Trematomus bernacchii (emerald rockcod): 117473707
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Entry
117473707 CDS
T09643
Symbol
plekhm1
Name
(RefSeq) LOW QUALITY PROTEIN: pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04140
Autophagy - animal
tben05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117473707 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117473707 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117473707 (plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117473707 (plekhm1)
Membrane trafficking [BR:
tben04131
]
SNARE
SNARE associated proteins
Others
117473707 (plekhm1)
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
117473707 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Dpoe2NT
Motif
Other DBs
NCBI-GeneID:
117473707
NCBI-ProteinID:
XP_033975361
LinkDB
All DBs
Position
Unknown
AA seq
1066 aa
AA seq
DB search
MLATQMPDTPPEAKDVKQIKDKLAQSLKALQKRYVTSDAVVTSEDSDANLLCCALEAIFI
HGIKSKYVRSEAGGRSRKGGRCPLPQPFFWSLLKTVTHRDVVTELEKISFVGTXVGRCRA
WLRLALNHGLLECYLASLFREGSKLRGHYQPSALLLNTEEREVLLSYLQGLASLTFNLSY
KSAVLNEWTTTPLALAGLCPMSQADTVELPLNGVDHPTAKSVNKEWDTVSQSSGSSDAQD
MQRGCPGKGTVVLQGDRNAMNSSNLSLDTTGSSQLSSSLSSDSLLQGQDPXSPTGEPWSS
YDLDMPINVNISTKRLQKDSPTEFRESGHCSQDSMREDSFVSSTDPDQNSETAVFSGSDS
ETQGPPSSSQDLVDPLPKSDSEPSPTSKENHVDYTLPEVCNNTSAELPLDTYRLSTVSEP
VESVEEEHPNFSHETTEPEQEEEGTPEPSVHPGSSRSLSILSRKLSTDSLSHSRSWXSED
DIYMPRLEEVPDQSETPPPAPPAEPSQSPPGVVHRRQRGLFNPFRGLLKLGHLERRGSMG
MWRDNYCELSPYEFRLYLNAEERTCSDNCSLLRCEEARIASSEGRFEVAFPGXRLYLRAA
NRDEAEDWVDRIVEAVKKCRPASRADDQWEVLVPTTENGVDALSPTSTPSSPERTSLASD
TGTGEGQEAPPLQEFDWTRTADIETDAIKETVLYFSNDPEARTWSPLVFSLSLEALKGFR
VQEGRKLLRQTHQIEEIRDVVPDVSLGGPAFFKLLTVRDTLRLRAENPEEARSWRVLIRG
ALDSYLESGEDGGSVEPAVGTGNLHRLVQHRLKEDGALLVNLCTVPSEKGLDTQSFKCAG
CPQQIGPSRGRARLCEFTRQYYCDSCHHGDTSIIPSRMVHNWDLEQREVCKKALHLLAQV
EQEPLLNLDQLNPELVKHADPMSEAHVLRQXLRLLGDYLLTCRSGACKKLQARMEQRTYL
LESSHLYSVLDLRQIAEGQYANYLLTLLQYASNHVFHCDLCTQRGFICQICHANDIIFPF
QFDITTRCKDCKAVFHLACKAAGVSCPRCQRMKKYLERDLRCGSEC
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgctagctacacagatgccagatacgccacctgaggctaaagatgtcaaacagatcaaa
gataagctggcacagtcactcaaggcccttcagaagcgatatgtgacgtcagatgcagtg
gtcaccagcgaggacagcgatgctaacctgctctgctgtgcgctggaggccatcttcatc
cacggtatcaagagcaagtacgtccgctctgaggctgggggccggagtcggaagggaggc
agatgtccgctcccacagcctttcttctggagcctcctcaagaccgtcacccatcgtgat
gtggtcactgagctggagaagatcagcttcgtgggaacangagtgggtcgctgccgagcg
tggctgcggctggccctcaaccacggcctgctggagtgctacttagcatcgctgtttcgt
gagggctccaagctgcggggccactaccagcccagtgccttgctcctgaacaccgaggag
cgggaagtcctgctcagctacctccagggtctcgcctctcttacgttcaacctatcctac
aagtctgctgtcctcaacgaatggaccaccacgcctctggctctcgccggactctgcccc
atgtcccaggcggacacggtcgaactgcccctcaacggcgtagaccaccccaccgccaaa
tctgtaaacaaagaatgggatacagtgtcgcagtcgtcaggctcttcagatgcacaggat
atgcagagagggtgcccagggaaaggcacagtggtattacaaggggacaggaatgcaatg
aactcgtcaaatttaagcctggacaccacgggctcctcgcagctctcctccagcctgagc
tctgacagcctgctgcaggggcaggaccccngcagccccacaggagagccctggtcctca
tacgacctggacatgcccataaacgtcaacatcagcaccaagaggctacagaaggattct
ccgacagagttcagggagagcggacactgcagtcaggactccatgcgtgaagactccttc
gtctccagcacggatcccgaccagaactcggagacggccgttttcagcggctccgacagc
gagacccagggtcccccttcttcatctcaggacctcgtggaccctcttccaaaatctgat
tcagagccctcgccaacatctaaagagaatcatgttgactacactctgcctgaagtgtgc
aacaatacctctgctgagctccctttggacacatacaggctctctactgtcagtgagccg
gtggagtctgtagaagaagaacatccaaacttttctcatgagactacagagcctgaacag
gaagaagaaggaactccagagccttcagtgcatccaggctcaagtcgctccctcagcatc
ctgagcaggaaactgtccacagattctctatcacattctcgttcctggnnatctgaggat
gacatctacatgccccgcctggaggaggtgccggaccagagcgagacgcctcctcctgcc
cccccggctgagccctctcagtccccccccggcgtcgtccatcgcagacaaagagggctg
ttcaaccctttccggggcttgctgaagctcggccacctggagcggcgcggttcgatggga
atgtggcgcgataactactgtgagctgtcgccctacgagttccggctgtatctcaacgca
gaggagcgcacctgcagcgacaactgctccctgctgcgctgtgaagaggctcgcatcgcc
tcatccgagggccgcttcgaggtggccttccctgganagcggctgtacctccgggcggcc
aatcgggacgaagccgaggactgggtggaccggatcgtagaagccgtcaagaaatgccgt
ccagcatctcgtgctgacgaccaatgggaggttctggtacccaccactgagaacggtgtg
gatgcgttgtccccgacctccaccccctccagccctgagcgcacttcactagcctctgac
acagggacaggggaggggcaggaggcgcctcctctacaggaatttgactggactcggact
gctgatatagaaacagatgcgatcaaagaaacagttttgtacttctccaatgatcccgag
gctcggacatggtctcctctggtcttctccctctctttggaggccttgaaaggtttccgg
gtccaagaggggaggaagctgctgcggcagacccaccagattgaggaaatccgggacgtg
gtgcctgacgtctctctgggagggccggcctttttcaaactgctgaccgtcagggacacg
ctgagactccgagcggagaacccggaggaggctcgctcctggagggttctgatccgcgga
gctctggactcgtacctggagagcggggaggacggaggctccgttgagccagctgtgggg
actggaaacctccacagactggtgcagcacagactcaaagaagatggagccctgcttgtt
aatctgtgcactgtgccctcagagaaggggctcgacactcagagcttcaagtgcgcaggg
tgtcctcagcaaattggcccgtcccgaggcagagcccggctttgtgagttcacacgacag
tactactgtgactcctgtcaccacggcgacaccagcattatcccttcacgcatggtgcac
aactgggacctcgaacaaagagaggtgtgtaagaaggccctgcatctgctggctcaggtg
gagcaggagcctctgctgaacctggatcagctgaaccctgagctggtgaagcacgcagac
cccatgtctgaggcccacgtgctgcggcagnagctgcgcctgctgggagactacctgctc
acctgccgcagcggagcctgcaaaaaactccaggccagaatggagcagcggacgtacctg
ctggagtcgagccatctgtacagcgtgctggacctgcgacagatagcagagggtcaatat
gcaaactacctgttgacactgctgcagtacgcctccaaccacgtgttccactgtgacctg
tgcacgcagcgcggcttcatctgtcagatctgccacgccaatgacatcatcttccccttc
cagtttgacatcaccaccaggtgtaaagattgtaaggcggtgtttcacctggcctgcaaa
gctgcgggggtttcgtgtcctcgctgtcagcggatgaagaaatacctggagagggatctg
cgctgcgggtctgagtgctga
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integrated database retrieval system
