Trematomus bernacchii (emerald rockcod): 117474096
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Entry
117474096 CDS
T09643
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00514
Other types of O-glycan biosynthesis
tben04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
117474096 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117474096 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tben01003
]
117474096 (rfng)
Enzymes [BR:
tben01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
117474096 (rfng)
Glycosyltransferases [BR:
tben01003
]
Glycan extension
O-Glycan
117474096 (rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
117474096
NCBI-ProteinID:
XP_033976004
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MKTLHRPVRMHIASVGVSKFCFLFSLAFCGLLLLLIPALQPQARQLDLPQPRPQVRPAPE
DHRLRAPGGSEHSEETDSAGWGRPIQTKGITHEIHSPKRGTDSKKGALPGGKGGRVSGSR
PRDLLELKDIFIAVKTTRKYHKSRLELLIQTWVSRAKEQTYIFTDGEDKELRMRTGVNII
NTNCSAAHTRQALCCKMSVEYDKFIESQKKWFCHVDDDNYVILPSLLQLLSTYHHSQDVY
LGRPSLDHPIEAAERVKSDGSVSVKFWFATGGAGFCISRGLALKMSPWASLGNFISTAEK
IRLPDDCTIGYIIEALLEVMLTHTHLFHSHLESLQKLPTDTVLEQVTLSFGGFENRRNVV
SIVGGFSLSEDPTRFKTVHCLLYPDTHWCPKLQHHPRT
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgctccatcggccagtcaggatgcatatagcctcagtgggtgtcagcaagttc
tgcttcctgttctccctggcgttctgcggcctcctgctcctgctcatcccggccctccag
ccccaggcccgccagctggacctgcctcagccccggccccaagtccgccccgctccggag
gaccaccgcctccgggctccaggagggtctgaacactcagaggagactgactcggcaggg
tggggcagacccatccagactaaagggatcacacatgagatccacagtcccaaaagaggg
acggactccaaaaaaggagcgctccctgggggaaagggtggtagagtttcagggtccaga
ccacgggacctgttggagttaaaggacatttttattgcagtaaagactaccaggaagtac
cacaagtccagactggagctgctgatccagacctgggtttcccgagctaaagaacagacc
tacatcttcactgatggtgaagacaaggagctccgcatgagaacaggagtgaacatcatc
aacactaactgctcagccgctcacacccgccaggctctgtgctgcaagatgtctgtggag
tacgataaattcatagagtctcagaaaaagtggttctgccacgtggatgatgataactac
gtgatcctgcccagcctgctgcagctgctctccacctaccaccacagccaggatgtgtac
ctgggccggcccagtctggaccatccaatcgaggcagcagagagggtcaagagtgatgga
tcggtgtcggttaagttctggtttgcaacaggtggagcaggtttctgtatcagcagaggc
ctggcactgaaaatgagcccatgggccagtttggggaacttcatcagcacagcagagaag
atccggctgccagacgactgcaccatcggctacatcatcgaggccctgctggaggtgatg
ctgacacacacacacctcttccactcacacctggagagcctgcagaagctgcccaccgac
accgtgctggagcaggtgactcttagcttcggaggctttgagaacagaaggaatgtggtc
agcattgttgggggcttttcactgtcggaagaccccacaaggtttaagacagtgcactgc
cttctgtatccagatactcactggtgtccaaaactccaacatcaccccagaacctga
DBGET
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