Trematomus bernacchii (emerald rockcod): 117474660
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Entry
117474660 CDS
T09643
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1 isoform X1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117474660 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tben03400
]
117474660 (nthl1)
Enzymes [BR:
tben01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
117474660 (nthl1)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
117474660 (nthl1)
Prokaryotic type
117474660 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
Motif
Other DBs
NCBI-GeneID:
117474660
NCBI-ProteinID:
XP_033976501
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MPQVRWKTRFCYVVRTLTMTSPYFMQSRPVITRSGDQNAASLRSKLTTRRRNQGPGSSVE
VKVEPEEARISEQRPSSAPLSTAEARQPQPNLHTCSHVVCFLSVFLCWVRYSKSSLPCAH
SGACHPKTETDALLLSSHSRRRKQLKVEYDEDEGVPPVKTEHWEPPDWQKQLGYIREMRS
SRYAPVDNMGAEKCYDSDAPAHVRRFQVLVSLMLSSQTKDQVTAAAMKRLRAHGCTAENI
LNTDDEALGKLIYPVGFWRTKVKYLKLTSAILQKEFGGDIPDSVEGLVRLTGVGPKMAHL
AMDIAWDQVSGIGVDTHVHRISNWLGWLKKPTKSPEQTRKALEEWLPRELWSEINWLLVG
FGQQVCLPVRPLCSVCLNQHSCPSAHKISPTKRPKAASPCSPDPTSASTEPGQESDVKHE
RLKKEPLPTPVSPNAPKRRIKTKVKY
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaggtccgctggaaaacgaggttctgttatgtagtccggactttaactatgacc
tctccttatttcatgcagagcagacctgttatcactcggagtggtgatcaaaatgcagcc
tctctcaggtccaaactcaccaccagacggaggaatcagggtccaggttcctctgtggag
gtgaaggtagagccggaggaggcgaggatctcggagcaaagaccctcctcggccccctta
tccacggcagaggcaaggcaacctcaacctaatctacatacttgttcccatgtggtatgt
tttctttctgtatttctgtgctgggtcagatattctaaatcctctctgccctgtgctcat
tctggtgcttgtcatccaaaaacagaaacagacgccttgctgttgtcttcacacagccgc
aggaggaaacagctaaaagtggaatatgatgaggatgaaggtgtaccaccggtgaagaca
gaacactgggaacctcccgactggcagaaacaactgggatacatccgtgagatgaggagc
agccggtatgcacctgtagataacatgggggcagagaaatgctacgactcagacgctcct
gctcatgtcagacgtttccaggtgttggtttcactcatgctgtccagtcagaccaaggac
caggtgaccgcagcagccatgaagaggctccgagctcacggctgcactgcagaaaatatt
cttaatactgatgatgaagcactggggaaactcatctaccctgtcggcttctggaggacg
aaggtgaagtatctgaagctgacatcggccattctgcagaaagagtttggaggggacatc
ccagacagcgtggaggggctggtccgcctaacaggagtcggacctaagatggctcatctg
gctatggacatcgcatgggaccaggtgtccggcatcggcgtggacacacacgtgcatcgt
atctctaactggctgggctggttgaagaaaccgaccaagagcccggagcaaacgcgcaag
gccctggaggagtggttaccaagggagctgtggagtgagatcaactggctgctggtgggt
ttcgggcagcaggtgtgtctccccgtcaggccgctctgctccgtgtgtctgaaccagcac
agctgtccctccgcccacaagatctctcctacaaaaaggcctaaagcggcttccccttgc
tcccctgatccaacctctgcctcgactgaacctggacaagaatccgatgttaaacatgag
aggttaaagaaggagccactgcccacacctgtttccccaaacgcaccgaaacgaaggata
aaaaccaaggttaaatattga
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