Trematomus bernacchii (emerald rockcod): 117475042
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Entry
117475042 CDS
T09643
Symbol
irg1l
Name
(RefSeq) LOW QUALITY PROTEIN: immunoresponsive gene 1, like
KO
K17724
aconitate decarboxylase [EC:
4.1.1.6
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
117475042 (irg1l)
Enzymes [BR:
tben01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.6 cis-aconitate decarboxylase
117475042 (irg1l)
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Ortholog
Paralog
GFIT
Motif
Pfam:
MmgE_PrpD_N
MmgE_PrpD_C
Motif
Other DBs
NCBI-GeneID:
117475042
NCBI-ProteinID:
XP_033976995
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MISTLQKTIRPVWAVRGLHKSAVEALKRPDPEDTVTASYGRFISEVKPQHLSSLVLHRSK
RMVLDSIGVGLIGSTTDVFELALQHCQHMYAPDDISSVYGRRGSRLSPTLAAFVNGVATH
SMDFDDTWHPATHPSGAVLPAVLALSDMMPNSKPSGPDFLLAFNVGIEIQGRLMRFSHEA
HNIPKRFHPPSVVGTMGSAAACARLLSLDHSQCSHALAIAASLSGAPMANAATQSKPLHI
GNASRLGLEAALLASRGLEASPLVLDAVAGVAGFDAFYEDYVPEPLESPNDGHVFLLEEQ
DMGFKRFPAHLGMHWVADAAASVHKLLVGLGPGTVSPSQVQDILLRVPKSKYINRPFPES
EHEARHSFQFNACSALLDGEVTVQSFTPAALRRPDLLALLSRVRVEHPHDNPANFNSMYG
EVQVTLVEGEILKGRCDHVLGHWRNPLTNESLRKKFRNNAGAVLRSEQVEGLIDVVGGLD
TLGDCRDLLSQLQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgatctccacattacagaaaaccattcgaccagtgtgggctgtcagggggctgcataag
tctgcagtagaagccttgaagcgcccagaccctgaagacacagtcacagccagctatggg
aggttcatcagtgaagtcaagcctcagcacttgtcatcactggtgcttcaccgcagcaaa
agaatggtgctggacagcatcggagttggcctcattggcagcactacagacgtgtttgaa
ttggccctgcagcactgccagcacatgtatgctcctgatgacatcagctctgtttacgga
cgcagaggcagcaggctctctcccacactggctgctttcgtcaatggagtggctactcac
tccatggactttgatgatacatggcaccctgccactcacccctcaggagcggtcctccct
gctgtgttagcactcagtgacatgatgcctaacagcaaacccagtggccctgacttcctg
ctggcattcaacgtcggcattgagatccagggcagattgatgaggttctctcatgaggcc
cacaacatccctaagaggtttcaccctccaagcgttgtggggaccatggggagtgcagct
gcctgtgctcgcctcttgtctctagatcactcccagtgcagtcatgccttggctatagct
gcttctctctctggagccccaatggctaatgctgccactcagtccaaaccccttcacatc
ggtaatgcctcacgtttggggctggaggctgctttgctggcctcccggggccttgaggca
agtcctctggtcctcgatgctgttgctggtgtggccggcttcgatgccttttatgaagac
tatgtgcccgagcctttagaatcccccaatgacggccatgtgttcctgctagaggagcag
gacatgggcttcaagcgcttcccagcccatctggggatgcactgggtagcagatgctgcc
gcctcggtccataagcttctcgtggggttgggccctggcactgtctccccatctcaagtc
caagacatcctgctcagagtccccaaatcaaagtacatcaacaggccattccccgaatct
gagcatgaggcacgccactccttccaattcaacgcttgcagcgctctcctggatggcgaa
gtgaccgtgcagtccttcactccggctgctctgaggcgcccagacctcctcgctctgctg
agtcgtgttcgcgtggagcatccccatgacaaccctgctaatttcaacagcatgtatggg
gaggtccaggttacacttgttgagggagaaattctgaagggacgctgtgaccacgttcta
ggtcactggcgtaacccgttgaccaatgagagcctgaggaagaagttcagaaacaacgcg
ggggcggtgcttcgctcagagcaggtggaggggctgattgatgtggtgggggggctggac
acacttggagactgcagggaccttctctcacagctgcaatga
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