Trematomus bernacchii (emerald rockcod): 117475130
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Entry
117475130 CDS
T09643
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1b allele 3-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117475130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117475130
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tben04054
]
117475130
Membrane trafficking [BR:
tben04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
117475130
Pattern recognition receptors [BR:
tben04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117475130
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FIIND
UPA-FIIND
CARD
Motif
Other DBs
NCBI-GeneID:
117475130
NCBI-ProteinID:
XP_033977140
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MKELLDGHLKSEEDKDIFYDIVEKWIPVIQAQGPRLDSQSESVDKLSSGGPPKFVKARTT
KIKMPTVVQVPEVHWITLKPEVICGDDEDTPIYSLQSDAGPFECGVSGLRWVCKEKVSLK
YQFGSWEEHMERMEALHFIPGGPLLDVTVIAGKLEEAYLPHWICTEDNPEVLGKFSVLHI
DTCGDVVEPVSEVTPSHVKLSQPHFSPRGVLMRAGFRIKINCKVLIFKTNLAFLTLHVYL
IPSDPALQQTIKSKELSSGYNMIKKPYPQKSLKMGKYFALKANMDSAEITPENLKLEYVG
SDPNFFEVFIENPDSNFQLVLTHTSGQVWTCIIRKDDYKNTGDIQRMYEEELARLRPELV
RNMSRELINQLLDDLLMDGVLNDGEKDSVLQENDTRADRARCLIDMVKRKGCEASRKIIC
HIQSRDPTLSADLGLPV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagctcttggatggtcatctaaaatctgaagaagacaaagacatcttctacgac
attgttgagaaatggataccagtaatacaagcacagggtccaagattggattcgcagtca
gagagtgttgacaaactcagcagtggaggacctccaaagtttgtcaaagcaagaacaact
aaaataaagatgccgaccgtagttcaagtacctgaggttcactggattacactcaaacct
gaagtgatctgtggggatgatgaggatactccaatttacagcctacagtctgatgcaggt
ccctttgagtgtggtgtctctggactgcgctgggtttgtaaggaaaaggtcagcttgaag
taccagtttggctcttgggaggaacacatggagaggatggaagctctgcacttcattcct
ggaggtccccttcttgacgttactgtcattgctggaaagttggaggaagcgtatctgcct
cactggatctgcacagaagacaaccctgaagtcttaggcaagttctcagtcctgcacata
gatacctgtggagacgtcgtggagccagtgtccgaggttacaccatcccatgtcaagttg
tctcagccgcatttctctccaagaggagtcctgatgagagctggctttcggataaaaatc
aactgtaaagtgttaatattcaagaccaacctggcattcctcacactacatgtgtatctg
atccctagtgatcctgctctgcaacagacaataaaaagcaaggaattatccagtggatac
aacatgatcaaaaagccatacccacagaagtccctgaaaatgggcaaatatttcgccctc
aaggccaacatggacagtgcagaaattactcctgagaatctaaagcttgaatatgtagga
agtgacccaaacttttttgaagtgttcattgaaaatccagacagtaatttccagctcgta
ctcacccatacatctggacaggtgtggacctgtatcattcgaaaagatgactataaaaac
actggtgatattcagaggatgtacgaagaggagcttgccagactgaggcctgaacttgtg
cggaacatgtccagagaactgatcaatcagctgctggatgaccttttaatggatggagtg
ttgaatgacggggagaaagactctgttcttcaggagaacgacaccagggcagacagggcc
cgctgcctcattgacatggtgaagaggaaagggtgtgaagcgagcaggaagatcatttgt
cacattcaaagcagagatcctacactgtctgctgatctgggtctgcctgtttaa
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