Trematomus bernacchii (emerald rockcod): 117476002
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Entry
117476002 CDS
T09643
Symbol
ltbp1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117476002 (ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117476002 (ltbp1)
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
117476002 (ltbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
TB
cEGF
EGF
hEGF
EGF_3
Plasmod_Pvs28
FXa_inhibition
EGF_MSP1_1
EGF_2
DUF5780
Motif
Other DBs
NCBI-GeneID:
117476002
NCBI-ProteinID:
XP_033978251
LinkDB
All DBs
Position
Unknown
AA seq
1478 aa
AA seq
DB search
MAWIRCGLLFSLGLFLSPVCVPAGQRGFRRLYVLQPGPGAGGPARLSSISTRHGTAGHTY
NVELSAELGGPVRTRRMGNQADSGPGGQSQQQTVKLSGVNVCGGMCCHGWAKTQGSQRCT
KPNCSPQCQNGGMCLRPQLCVCKPGSKGNACEQQTVPTHPFPLPGSGPTNGHGTGSSNGH
TYGHNGVPHRPIPQQAAPSGYAPLSSNTMAQMKLSVKPAPQHVRPHYVQQQIRPIPMHPG
QSQQYVIKPKYYHTHTTHTQTRVQSQPERPIPLTVGHNPIHVGNHTGRIKVVFTPTICKL
TCIGGRCHNNCELGNTTTIISENGHATDTLTAPNFRVVVCHLPCMNGGKCSTRDKCQCPP
NFTGKFCQMPARSGQQQPAGGYSQTQVHSTHTLPLTYSNGQNPVFNPSIVNIHIKHPPEA
SVQVHQVSQLDNYHNNGQPLKGSRSSSSSSSSYTYRHTESSQNIQHHGYNIVYPSQHAHQ
VPQYQPVTSKNTLGRCFQETAGSQCGKALPGLTKQEQCCQTIGTSWGFHKCQKCPKQPSI
PLIDCPHGYRRINSSHCQDVDECQLQGVCPNGNCLNAVGSYRCTCKPGFVPDSTLTTCIS
NTPAIPEEKGACFRLVSSGRQCLHPVSTQLSKQLCCCSVGKAWGPRCDKCPPPGTAKFKG
ICPGGMGYTVLPNPPVNKPITINQEPIEIPPQPLPTQERPVEAFGKPEEFIPVATTAPEQ
ELLVPVRDRPVVEPILPQLSPGVSTVKMEAAYPEVVERSSPPAPVEILPSNAGQGIAPTQ
SAEVDECQISPFICGQGICYNTAEGYTCHCDEGYHLDDAQTTCVDVDECLESPPSCVGGR
CENTEGSFLCVCPEGFLVDEEGTSCLDLDECQDQRTCTRGHCQNTEGSFLCHCGPGFRGS
LAGDDCDDVDECLEEARPCESGGECVNNMGSYTCSCPRGYRQVNGTRCSDVDECVDEPEL
CSPHAECLNTEGSYLCVCESGFSASIHTPSCDDIDECGLNDTLCGPHGFCENRLGSFRCL
CEQGYQEAPGGQGCVDVNECELLSSVCGEAQCKNTDGSFHCECPSGQDYNVMIAKCEPVP
TVSSVERKECYYNLNNENLCENVLTSHVTLQECCCTLGAGWGDNCEVHPCPVNGTDQFNQ
MCPSGRGLIPNGDLLYGVPTAGSYKDADECALFGQEVCKGGFCLDTVGSYECYCKTGQDY
DPARLECRDIDECQDESVCADGECMNTDGSYMCFCTHPMVLDPNSNRCVFPPEEAEEQEA
AQLVDYHGGVCWQAVTESMTCTRPLAPHIDTTYTECCCLHGEAWGMDCALCPPRDTEDYA
SMCNLGWRRAYGRDALVAGPVHEYEVDSDYSPSPEQEGALPFYENEELPFKAFEGLRAEE
CGILNGCENGRCVRVQEGYTCDCFDGYTLDLSRMACVDVNECSELNSRMSLCKNAKCINT
VGSYQCVCLPGFTSSEKPNYCVEAATHRTTHTASRNRH
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggcttggattagatgcggcctgctgttctctctgggtctgttcctctccccggtgtgt
gtgccggcggggcagcgcggcttcaggcggctgtacgtgctgcagcccggcccgggagcc
ggcggcccggcgcggctcagctccatctccacgcgtcacggcacggcggggcacacatac
aacgtggagctcagcgcggagctcggcggcccggtgcggacccgcaggatggggaaccag
gcggactccggtcccggcgggcagagccagcagcagaccgtgaagctgtctggggtgaac
gtctgtggagggatgtgctgtcacggatgggccaaaactcaggggtcccagcggtgcaca
aaacccaactgcagccctcagtgccagaacggtggaatgtgcctccggcctcagctctgc
gtctgcaaacctggctcaaaggggaatgcatgcgagcagcagacggtgcccacacacccc
ttccctctgccggggagtggacccaccaacgggcacggcactggctcctcaaacgggcac
acgtatggacacaatggggttccccaccggcccatacctcagcaggctgctcccagtggt
tacgcccccctttcatctaacaccatggcccagatgaaactaagtgtcaagccagccccc
cagcatgtacggccacattacgtccaacaacagatccggcccatccccatgcacccaggt
caaagccagcagtatgttataaagcccaaatactaccacacacacactacacacacacag
acacgtgtccaatcccaacctgagaggcccatccccctgaccgtgggacacaaccccatc
cacgtgggcaaccatacagggaggatcaaggtggtcttcacacccaccatctgtaaacta
acctgcatcggaggaagatgtcacaacaactgtgagctgggaaacaccaccaccatcatc
agtgagaacggccacgccaccgacaccctgacagcacccaacttcagagtagttgtgtgt
cacctgccctgtatgaatggggggaagtgcagcaccagggacaagtgtcagtgccccccc
aactttaccgggaagttctgccagatgcccgctcggagcggccagcagcagccggcgggg
gggtacagccagacccaggtccactccacacacaccctgccgctgacctacagcaacgga
cagaaccctgtgttcaaccccagcatcgtgaacatccacatcaaacaccccccagaggcc
tcggtccaggtgcaccaggtgtctcagctggataactaccacaacaacgggcagcctctg
aaggggtcccgctccagctcctcttcctcctccagctacacctaccgccacacggagagc
agccaaaacatccagcaccacggctacaacattgtgtaccccagccagcacgcacaccag
gtcccccagtaccagcccgtcacctccaagaacactctggggcgctgcttccaggaaaca
gcaggcagtcagtgtgggaaggctctgccaggcctcactaagcaagagcagtgctgccag
actatcgggacgtcctggggattccacaagtgccagaagtgtccaaagcaaccatctatt
cctctgatagattgtcctcacggttacaggagaatcaacagctcccattgccaagatgta
gacgagtgccagctgcagggtgtgtgtcccaatggaaactgtctgaatgctgtggggagc
tacaggtgcacatgcaaaccaggcttcgtccccgactccacgctcaccacttgcatatcc
aacacccctgccatcccagaggaaaagggggcttgcttccgcttggtcagctcagggagg
cagtgtttgcacccagtgtccacccagctgagcaaacagctctgttgctgcagtgtgggc
aaagcctggggccctcgctgtgacaaatgcccccctccaggaacagctaagttcaaaggc
atctgtcccggtgggatggggtacactgttctacccaatccgcctgtcaataagccaatc
accatcaaccaggagcccattgagattcctcctcagcccctgcccacccaagagagacca
gtggaggcctttgggaagccagaagagtttataccagtagcaacaactgcaccagagcag
gagctgctagttcctgttagagataggccagtagttgagcccatcctgccccagctgtct
ccgggtgtttccactgtcaagatggaggcagcctacccagaggttgttgagaggagctct
ccgcccgccccagtggagatcctcccgtctaacgccggacagggcatcgctcccacacag
tccgctgaggtagacgagtgccagatcagccctttcatctgtggccaggggatctgctac
aacacagcggagggatacacctgccactgtgatgaggggtaccacctggatgacgcccaa
accacctgtgtagatgtagatgagtgtttggagagcccgccctcttgtgttggcggtcgc
tgcgagaacacagagggcagtttcctgtgtgtgtgtccggagggattcctcgtggatgaa
gaggggactagttgtttagatctagatgagtgccaggaccagcggacctgcacccggggc
cactgccagaacaccgaggggtccttcctctgccactgtggccccggcttcagagggtct
ttggctggagacgattgtgatgatgtggatgagtgtttagaagaagcccggccctgtgag
tccgggggggagtgtgtgaacaacatggggtcctacacctgctcctgcccccgggggtac
cggcaggtcaacggcacccgctgctcagatgttgatgagtgtgtggatgaaccagagctc
tgctccccccacgcggagtgtctcaacacagaggggtcctatctgtgtgtgtgtgagagc
gggttcagtgccagcatccacacgccctcctgtgacgatatcgatgagtgtgggctcaac
gacactctgtgtggccctcacggcttctgtgagaaccggttggggtctttccgctgcctc
tgtgagcagggctaccaggaggccccggggggccagggctgtgtggatgtgaatgagtgt
gagctgctgagcagtgtgtgtggagaggcccagtgtaagaacactgacggatccttccac
tgcgagtgtcccagcggacaggactacaatgtgatgatcgccaagtgtgagcccgttccc
acagtttcctcagtggagcgtaaggagtgctactacaatctaaacaatgagaatctgtgt
gagaacgtgctgaccagccacgtcaccctgcaggagtgctgttgcaccctgggagctggg
tggggggacaactgtgaggtgcacccctgtcctgtcaatggcacagaccagttcaatcag
atgtgtccgtctggaagaggtcttattcccaatggagacttattgtatggggtacccaca
gctggcagctacaaagacgcagatgagtgtgcgctgttcggccaggaggtgtgtaaagga
ggcttctgtttggacacggtgggcagctatgagtgttactgcaagaccggacaggactac
gaccctgccagactggagtgcagagacatcgatgagtgtcaggatgagtcggtgtgtgct
gatggagagtgtatgaacacagacggctcatacatgtgtttctgtacacaccccatggtg
ctggaccccaactccaaccgctgcgtcttcccccctgaggaggctgaggaacaggaggcg
gcccagctggtagactaccatggtggagtgtgctggcaggcggtgacagagtccatgacg
tgcacgcgcccgctggctccacacatcgataccacatacacagagtgctgctgtctgcac
ggggaggcctggggcatggactgtgccctgtgcccccccagagacacagaggattatgcg
tccatgtgtaacctcggctggcggcgggcgtacggtcgcgatgcgcttgttgccggcccg
gtccatgaatatgaagtggactctgactactccccgtcccctgagcaggagggggccctg
cctttttatgagaacgaggaacttccgtttaaggcctttgagggtctgcgggcagaggag
tgtgggatcctgaacggctgtgagaacgggcgctgtgtgcgggttcaggagggctacacc
tgcgactgcttcgacggatacaccctggacctgtcccgcatggcctgtgtcgatgtgaac
gagtgctcggagctaaacagtaggatgtcactgtgtaaaaatgcaaagtgcattaacaca
gtgggttcttatcagtgtgtgtgtctgccgggcttcacttcctctgagaaacccaactac
tgtgtggaggcagcaacacaccgaacaacacacacagcgagcaggaaccgacactag
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