Trematomus bernacchii (emerald rockcod): 117476129 Help Entry 117476129         CDS       T09643                                  Symbol sqstm1 Name (RefSeq) sequestosome-1   KO K14381   sequestosome 1 Organism tben  Trematomus bernacchii (emerald rockcod) Pathway tben04137   Mitophagy - animal tben04140   Autophagy - animal tben04217   Necroptosis tben04218   Cellular senescence Brite KEGG Orthology (KO) [BR:tben00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     117476129 (sqstm1)    04137 Mitophagy - animal     117476129 (sqstm1)   09143 Cell growth and death    04217 Necroptosis     117476129 (sqstm1)    04218 Cellular senescence     117476129 (sqstm1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tben04131]     117476129 (sqstm1)    03029 Mitochondrial biogenesis [BR:tben03029]     117476129 (sqstm1)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:tben04147]     117476129 (sqstm1) Membrane trafficking [BR:tben04131]  Autophagy   Mitophagy    Cargo receptors     117476129 (sqstm1)   Pexophagy     117476129 (sqstm1)   Aggrephagy     117476129 (sqstm1)   Xenophagy     117476129 (sqstm1)   ER-phagy    ER-phagy recepters     117476129 (sqstm1)   Other autophagy associated proteins    Midbophagy     117476129 (sqstm1) Mitochondrial biogenesis [BR:tben03029]  Mitochondrial quality control factors   Mitophagy factors    Parkin-dependent mechanism factors     117476129 (sqstm1) Exosome [BR:tben04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    117476129 (sqstm1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  UBA_5 ZZ PB1 HGTP_anticodon2 Gp44-like_2nd Motif Other DBs NCBI-GeneID:  117476129 NCBI-ProteinID:  XP_033978404 LinkDB All DBs Position Unknown AA seq 469 aa AA seqDB search MALTVKAYLLGRDQVVKEVRRFNVDQEVSCSFEYLQSRTSSVFSSLRDFNLYYRDEDEDL VAFSSDDELMMGLACMKDGPFRLYIKEKKENRRDFPLHAFPPFTFGPSGPHGPPHGPPHG PPPGPATHPDVTCDGCEGPVVGTRFKCSVCPNYDLCSACQARGTHTEHQLLPIWHPMQWF PRGKWMKRMRHCMWNQNQNQQPGPSRPDCSAPSAQDNVDFLKNIGEGVAAMLSPLGIDVD IDVEHEGQRTKVTPPPQREGGGASSEGGGACSEGGGASSEGSKVCRDSDEEWTHLNPREV DPSSGELQSLQPGDLDPDQDLDPDQNQDQDKKQDPEQDPDENQKQDQGKGQNQDKDLTDQ VQVQAQNQAQNQVQAQNQAQNQAQNQAQNQVQAQNQAPSSGQQGPTGLREAALYPDMPQD PRQMETLSQMLAMGFSDEGGWLTRLLRAKDFDIGAALDAIQFQPPPHRT NT seq 1410 nt NT seq  +upstreamnt  +downstreamnt atggcgctgacggtgaaggcctacctgctgggtcgggaccaggtggtgaaggaggtccgg aggttcaacgtggatcaggaggtttcctgcagcttcgagtacctgcagtccagaaccagc agcgtgttctccagcctgagggacttcaacctgtactacagagatgaagacgaggacctg gtggcgttctcctctgatgacgagctgatgatgggtctggcctgcatgaaggacggcccg ttccgcctctacattaaagagaagaaggagaaccgtcgggacttcccgctgcacgccttc ccccccttcaccttcgggccctccggtccccatggacccccccatggacccccccatgga cccccccctgggcccgccacccaccctgatgtgacctgtgatgggtgcgagggccctgtg gtgggaacccgcttcaagtgctccgtgtgtccaaactacgacctgtgctccgcctgccaa gcgagaggaacccacacggagcaccagctgctgcccatctggcaccccatgcagtggttt cctcgggggaagtggatgaagaggatgagacactgcatgtggaaccagaaccagaaccag cagccaggaccctccagaccggactgcagcgccccctctgctcaggacaacgtggacttc ctgaagaacatcggggagggcgtggcggccatgttaagtcctctgggtatcgacgtggac atcgacgtggagcacgagggccagaggaccaaggtgacgcccccccctcagagagaaggg ggtggagccagcagcgaggggggcggagcctgtagcgaggggggcggagccagcagcgag gggtcaaaggtgtgcagagactctgatgaggagtggactcacctgaacccccgagaggtc gacccgtccagcggagagctgcagtccctccaacccggggacctggacccagaccaggac ctggacccggaccagaaccaggaccaggacaagaaacaggacccagaacaggacccggat gagaaccagaaacaggaccaaggcaagggccagaaccaggacaaagaccttacagaccag gtccaggtccaggctcagaaccaggctcagaaccaggtccaggctcagaaccaggctcag aaccaggctcagaaccaggctcagaaccaggtccaggctcagaaccaggctccctcgtct ggacagcagggtccaacaggtctgagggaggcggctctgtaccctgacatgccccaagac ccccgccagatggagaccctctcccagatgttggcgatgggtttctcagatgagggcggc tggctcactcgtctccttcgggccaaagacttcgatatcggcgccgccctcgacgccatc cagttccagccccccccacacagaacctga

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