Trematomus bernacchii (emerald rockcod): 117476319
Help
Entry
117476319 CDS
T09643
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04010
MAPK signaling pathway
tben04137
Mitophagy - animal
tben04141
Protein processing in endoplasmic reticulum
tben04210
Apoptosis
tben04217
Necroptosis
tben04621
NOD-like receptor signaling pathway
tben04622
RIG-I-like receptor signaling pathway
tben04920
Adipocytokine signaling pathway
tben05132
Salmonella infection
tben05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117476319
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117476319
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117476319
09143 Cell growth and death
04210 Apoptosis
117476319
04217 Necroptosis
117476319
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117476319
04622 RIG-I-like receptor signaling pathway
117476319
09152 Endocrine system
04920 Adipocytokine signaling pathway
117476319
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117476319
09171 Infectious disease: bacterial
05132 Salmonella infection
117476319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117476319
04121 Ubiquitin system [BR:
tben04121
]
117476319
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117476319
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117476319
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
117476319
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
ATG16
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
117476319
NCBI-ProteinID:
XP_033978644
EnsemblRapid:
ENSTBNG00005018759
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MATQEPSPPSSMESNKPGFPKKILGNKLEDKHLCNCCHNILRRPFQAQCGHRFCSYCFNR
TVSNGPQKCSACIKEDIFEEPTSLLKQGCAFPDNAVRREVENLSAVCIHENCTWKGSIKD
YELNHEGKCEFMILPCPSCKERIRFNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRFHVVGCDMSVEKEKIHDHERTYA
YEHLNLLLHYIMGMKVSMEGLQPQGLEVAGHKLLELQQSLRELEARVSQLSTTSSGPPVQ
GAAAATASTSSSSSGPPGPPTLAPLPPPPTLAPTLSVSTSFTPLPSSVGAALELQLHSEK
TKVVELGRRCTELEVKSGTFENVVCVLNREVERFATTMEASNRQHKLDQDKIEALSNKVR
QLERTVGLKDLTVAEMEGRLREMSATTFDGVFVWRISDFAKKRQDAIAGRAPAMFSPAFY
TSKYGYKMCLRIYLNGDGTGRGSHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQSNREH
IIDAFRPDVTSSSFQRPVSEMNIASGCPLFCPLSKLDAKNSYIRDDTIFIKAIVDLTGL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggccacacaggagccgtcccccccctcctccatggagagcaataaacccggcttcccc
aagaagatcctgggcaacaagctggaggacaagcacctgtgcaactgctgccacaacatc
ctgcgacggccctttcaagcccagtgtggacatcgcttctgttcctactgcttcaacagg
actgtcagtaatggaccccagaagtgcagtgcctgtattaaagaggatatttttgaagaa
cctacatcgcttttgaaacaaggatgtgcttttcctgacaacgcagttcggagggaggtc
gaaaacctttcagctgtttgtatccatgaaaattgcacttggaaaggcagcattaaagac
tatgagctgaaccacgagggaaagtgtgagttcatgatcctcccctgcccctcctgtaaa
gaacgaatccgcttcaatgaacaggagcgccataatgagcgagagtgcccggagagaaca
ctcaactgcaagtactgcaaggagccatttcacttcaaaaacatcaaggcacatgatgag
atctgtcccaagtacccgatgatctgtgaaggctgtgccaagaagaaaatacccagagag
aagtacgtggaccacattaagttctgcagcaaattcagaacaccgtgtcgatttcatgtc
gtgggatgtgatatgtctgtggaaaaggaaaagattcatgaccatgagcgcacctatgcc
tacgagcacctcaacctgctactgcactacattatgggcatgaaggtgagcatggagggc
ctgcagccccagggactggaagtagctggacacaagctgctggagctccaacagtccctc
agggagctggaggccagagtctcccagctcagcaccacctcctctgggcctcccgtgcag
ggagcagccgccgccactgcctccacctcatcctccagctccggcccccctggtccaccc
actttagctcctctccctccccctcccaccctggctcccactctctccgtctctacctcc
ttcacccccctgcccagctcggtgggtgcggcgctggagctccagctccacagcgagaag
accaaagtggtggagctgggtcgcaggtgtacggagctcgaggttaaatccggcacgttt
gaaaatgtggtgtgtgtcctgaacagagaggtggagcggtttgccaccaccatggaggcc
agcaaccgtcagcacaaactggaccaggacaagatcgaggctctgagtaacaaggtgcga
cagctggagaggacggtggggctgaaggacctcacggtggctgagatggagggccggctg
agggaaatgtctgccacaacctttgatggcgtcttcgtctggaggatctctgatttcgcc
aaaaaaagacaagatgccatcgctggtcgggcccctgcaatgttttcaccagccttttac
accagtaagtacggatataagatgtgtctgcggatctatctgaatggagatgggacgggg
cgtggcagccacttgtccctgttctttgtggtgatgaggggactgagtgacgctctgctc
aaatggcctttcaatcagaaggtgactctgatgctgctggaccagagcaacagggagcac
atcatcgacgcctttcgccctgatgtcacttcatcttccttccagcgaccggtgagcgag
atgaacatcgccagcggctgtccgctcttctgcccgctctccaagctcgatgccaagaat
tcctacatccgcgacgacaccatcttcatcaaggccatcgtggacctcaccggcctctag
DBGET
integrated database retrieval system