Trematomus bernacchii (emerald rockcod): 117476522 Help Entry 117476522         CDS       T09643                                  Symbol traf2b Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism tben  Trematomus bernacchii (emerald rockcod) Pathway tben04010   MAPK signaling pathway tben04137   Mitophagy - animal tben04141   Protein processing in endoplasmic reticulum tben04210   Apoptosis tben04217   Necroptosis tben04621   NOD-like receptor signaling pathway tben04622   RIG-I-like receptor signaling pathway tben04920   Adipocytokine signaling pathway tben05132   Salmonella infection tben05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:tben00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     117476522 (traf2b)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     117476522 (traf2b)  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     117476522 (traf2b)   09143 Cell growth and death    04210 Apoptosis     117476522 (traf2b)    04217 Necroptosis     117476522 (traf2b)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     117476522 (traf2b)    04622 RIG-I-like receptor signaling pathway     117476522 (traf2b)   09152 Endocrine system    04920 Adipocytokine signaling pathway     117476522 (traf2b)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     117476522 (traf2b)   09171 Infectious disease: bacterial    05132 Salmonella infection     117476522 (traf2b)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tben03019]     117476522 (traf2b)    04121 Ubiquitin system [BR:tben04121]     117476522 (traf2b) Enzymes [BR:tben01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      117476522 (traf2b) Messenger RNA biogenesis [BR:tben03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      117476522 (traf2b) Ubiquitin system [BR:tben04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     117476522 (traf2b) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-C3HC4_4 zf-RING_5 zf-C3HC4_3 zf-RING_6 zf-C3HC4_2 Paramyxo_NS_C zf-RING_2 Mcp40H-20_sensor zf-C3HC4_5 Motif Other DBs NCBI-GeneID:  117476522 NCBI-ProteinID:  XP_033979018 LinkDB All DBs Position Unknown AA seq 520 aa AA seqDB search MAYISMDCPSSLPGIPQSVLSVPMENKYKCQQCHQVLRKPVQAQCGHRFCVHCFKQLTSS GPKPCEACREEEIYEEPFSILNSNEAFPDNAAGREIASLPARCLNEGCDWTGSIKEYEAQ HEGRCELERLKCEACQNTILLSEKDKHNERECEERTLNCKYCKTSFNFKEIKAHDEICPK FPLQCKDCGKKKIPREKFSDHSKSCAKSKSACPFSDVGCKHVIENGKQSDHEHSSTMEHL RLLLPMVLSIAVPPSDASGPGEWQEDSGLGLYRAPEEGVSMGSGAAASSQSMDLDKKVKA LENIVCVLNREVERSAVTLEAFAHQHRLDQDKIENLSSKVRQLERTIDMRDLKLSETEQL VRELQFCTFDGIFVWKISDFSRRRQDAVASRTPAMFSPAFYSSKYGYKMCLRLYLNGDGT GRGTHLSLFFVVMRGKCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVTSTSFQRPIS EMNIASGCPLFCPLARLAGKSPYLRDDTIFIKAIVDLTGL NT seq 1563 nt NT seq  +upstreamnt  +downstreamnt atggcctacatctcgatggactgccccagctctttacccgggattcctcaaagtgtgctg tcagtgcccatggaaaataagtacaaatgtcagcagtgtcaccaggtcctgaggaagcct gtccaggcccagtgcggacatcgcttctgtgtacactgcttcaagcagctcaccagttct ggcccaaagccttgtgaagcctgccgcgaagaggagatatacgaggaacctttttcgatt ctaaatagtaatgaggcatttccagacaatgcagcaggacgagaaatagcaagcctgcct gccaggtgtctgaacgaaggctgtgattggacaggctccataaaagagtatgaggctcag catgaaggtcgttgtgaacttgagcggttaaagtgcgaggcctgccaaaacacgatcctt ctttcggagaaggacaaacacaatgagagagaatgtgaagaaagaacgctaaactgcaaa tactgcaaaacatccttcaactttaaagagatcaaggcccatgatgagatctgtccaaag tttcccttacaatgcaaagactgtggcaagaagaagatcccaagagaaaagttcagtgac cacagcaaatcctgtgccaagtcaaagagtgcctgtcccttcagtgatgtgggctgtaaa catgtgatagagaacgggaagcagagcgaccatgagcacagcagcaccatggagcacttg cgtctgctgctgcccatggtgctatccattgccgtgccgcccagcgatgcttccggtccc ggagagtggcaggaggactcaggtctgggcctgtacagggcccctgaggagggggtcagt atgggctctggagctgcagcctccagtcagtctatggacctagataaaaaggtaaaagct ttggaaaacattgtgtgtgtcctgaaccgagaggtagagcgcagcgcagttactttagag gctttcgcacatcaacatcgtttagaccaggacaaaatagaaaatctctccagtaaagtg cgtcagctggaacggacaatcgacatgagggacttgaaactgtcggaaactgagcaactg gtgcgggaacttcagttctgcaccttcgacgggatctttgtgtggaaaatctccgacttc tcacgccgcagacaggacgccgtggccagtcgaacacctgctatgttctctccagcattt tattccagcaaatacggctacaaaatgtgtctgaggctgtatttgaatggcgacgggacg ggtcgagggactcacctttcgctgttctttgtcgtcatgaggggaaagtgcgacgctctg ctcaaatggcccttcagtcagaaggtgacgctgatgctcttggatcagaacaacagggag cacatcatcgacgccttccggcccgacgtcacctccacctccttccagcggcccatcagc gagatgaacatcgccagcggctgcccgctcttctgcccgctcgccaggctggccggcaag agcccctatctgagggacgataccatcttcatcaaggccatcgtggacctcacaggcttg tag

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