KEGG   Trematomus bernacchii (emerald rockcod): 117477305
Entry
117477305         CDS       T09643                                 
Name
(RefSeq) nectin-2-like isoform X1
  KO
K06531  poliovirus receptor-related protein 2
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben03266  Virion - Herpesvirus
tben04514  Cell adhesion molecules
tben04520  Adherens junction
tben05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    117477305
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    117477305
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    117477305
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117477305
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:tben04515]
    117477305
   04090 CD molecules [BR:tben04090]
    117477305
Cell adhesion molecules [BR:tben04515]
 Immunoglobulin superfamily
  Nectin family
   117477305
CD molecules [BR:tben04090]
 Proteins
  117477305
SSDB
Motif
Pfam: ig V-set C2-set_2 Ig_3 Ig_2 I-set TM_ErbB1 DUF4342 DUF865
Other DBs
NCBI-GeneID: 117477305
NCBI-ProteinID: XP_033979874
LinkDB
Position
Unknown
AA seq 528 aa
MARHDARNWHDCSKMIGLLCLVASIVLQHGVSGQRVKVEPEVLSYPGQTVNLRCAFTDAT
GIQLTMVTWIYEPKDGERINIAVFLPNYDPNYPDSPVKGRVSFAPSPPNVVSPSIEISNV
GMTDEGKYICEYATYPSGNEQGITHLVMLAKPQNSASIVTVVAGSKSVVVARCESVDGRP
PAKISWVTAANGNGTTVTKPGADNTVTVISEYSMVPSPKDNGKDLSCVVAHRTQVKPESF
HLKLAVEFAPQVTIVGYDNNWYVGRTNVELTCQATGNPTPLTAQWKTMTGEMPDTVQITD
NKLKVLKVDDAVNTTFVCEVKNRIGLGRDQVAVMVREPSVNPSNAGVVAGAVIGSLLALL
LVAALIAVLITRSRRQQQGYRANGGTDMKTRMFGGGKKASKNGTGGGNGSGVGVGGGNNN
GPIYVYDQGSSHPGLGEKNNHHQPLTMGGVATTPTAQDILLSNELDDGERRKFDELEEDE
RYDNFTGGAPILQLRPPHDQDDIIGDYMDDDMESQRDGSVISRTAVYV
NT seq 1587 nt   +upstreamnt  +downstreamnt
atggcgagacatgacgcccgaaactggcatgactgctccaaaatgatcggactgctctgc
ctggtggcgtcgatagttcttcaacacggagtgtcgggtcagcgggtgaaggtggagccc
gaggtgttgtcttaccccggccagacagtcaacctgcgctgtgccttcactgatgccact
gggattcagctcacaatggtcacctggatctacgagccgaaggatggagagaggatcaac
atcgccgtgtttctacccaactatgatcccaactaccccgactcgcccgtgaagggcaga
gtcagcttcgcgcccagcccccccaacgtggtcagcccctccatcgagatcagcaacgtg
gggatgaccgatgaggggaagtacatctgcgagtatgccacctaccccagcggcaacgag
caaggcatcacgcacctcgtcatgctggctaagcctcagaactcggcctccatcgtgacc
gtggtggcgggcagtaagtcggtcgttgtggcgcgctgcgagtccgtggacggccgcccc
cctgccaagatctcctgggtgaccgcagccaatggcaacggcacaacggttaccaaaccg
ggcgccgacaacacggtgacggtgatcagcgagtacagcatggtcccctcccccaaagac
aacgggaaggacctgagctgcgtggtggctcacaggacgcaggtcaaaccagagagcttc
cacctgaagctggcagtggaatttgcccctcaggtgacaatagtaggttacgacaataat
tggtacgtgggtcgtacaaatgtggagctcacctgccaggccacgggaaaccccacgccg
ctgaccgcccagtggaagacgatgacgggagagatgcccgacacggtgcagatcacagac
aacaagctgaaggtgctgaaggtggacgacgccgtcaacaccacttttgtctgcgaggtc
aagaaccgcatcgggctgggcagggatcaggtcgccgtcatggtcagagagccctcagtg
aacccatccaatgccggcgtggtggcgggagctgtgattggctccctgctggctctcctt
ttggtcgccgctctcatcgccgtgctcatcacccgtagccgccggcaacagcagggttac
cgcgccaacggcggcaccgacatgaagacgcgcatgttcggcggaggcaagaaggccagc
aagaacggcacgggcggaggcaacgggagcggagtaggagttggaggcgggaacaacaat
gggccgatctacgtctacgatcagggctcctcccatccgggcctcggagagaaaaacaac
caccaccagccactcaccatggggggcgtcgccacgacacccaccgcccaagatatcctg
ttgagcaacgagctagatgacggcgagaggaggaagtttgacgagctggaggaggacgag
agatatgataatttcaccggaggcgcccccatccttcagctccgcccgccacacgaccag
gacgatataattggagactacatggatgacgacatggagtcccagcgagatggatccgtc
atctcacggactgctgtctacgtatag

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