Trematomus bernacchii (emerald rockcod): 117477305
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Entry
117477305 CDS
T09643
Name
(RefSeq) nectin-2-like isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03266
Virion - Herpesvirus
tben04514
Cell adhesion molecules
tben04520
Adherens junction
tben05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
117477305
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117477305
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117477305
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117477305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tben04515
]
117477305
04090 CD molecules [BR:
tben04090
]
117477305
Cell adhesion molecules [BR:
tben04515
]
Immunoglobulin superfamily
Nectin family
117477305
CD molecules [BR:
tben04090
]
Proteins
117477305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ig
V-set
C2-set_2
Ig_3
Ig_2
I-set
TM_ErbB1
DUF4342
DUF865
Motif
Other DBs
NCBI-GeneID:
117477305
NCBI-ProteinID:
XP_033979874
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MARHDARNWHDCSKMIGLLCLVASIVLQHGVSGQRVKVEPEVLSYPGQTVNLRCAFTDAT
GIQLTMVTWIYEPKDGERINIAVFLPNYDPNYPDSPVKGRVSFAPSPPNVVSPSIEISNV
GMTDEGKYICEYATYPSGNEQGITHLVMLAKPQNSASIVTVVAGSKSVVVARCESVDGRP
PAKISWVTAANGNGTTVTKPGADNTVTVISEYSMVPSPKDNGKDLSCVVAHRTQVKPESF
HLKLAVEFAPQVTIVGYDNNWYVGRTNVELTCQATGNPTPLTAQWKTMTGEMPDTVQITD
NKLKVLKVDDAVNTTFVCEVKNRIGLGRDQVAVMVREPSVNPSNAGVVAGAVIGSLLALL
LVAALIAVLITRSRRQQQGYRANGGTDMKTRMFGGGKKASKNGTGGGNGSGVGVGGGNNN
GPIYVYDQGSSHPGLGEKNNHHQPLTMGGVATTPTAQDILLSNELDDGERRKFDELEEDE
RYDNFTGGAPILQLRPPHDQDDIIGDYMDDDMESQRDGSVISRTAVYV
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcgagacatgacgcccgaaactggcatgactgctccaaaatgatcggactgctctgc
ctggtggcgtcgatagttcttcaacacggagtgtcgggtcagcgggtgaaggtggagccc
gaggtgttgtcttaccccggccagacagtcaacctgcgctgtgccttcactgatgccact
gggattcagctcacaatggtcacctggatctacgagccgaaggatggagagaggatcaac
atcgccgtgtttctacccaactatgatcccaactaccccgactcgcccgtgaagggcaga
gtcagcttcgcgcccagcccccccaacgtggtcagcccctccatcgagatcagcaacgtg
gggatgaccgatgaggggaagtacatctgcgagtatgccacctaccccagcggcaacgag
caaggcatcacgcacctcgtcatgctggctaagcctcagaactcggcctccatcgtgacc
gtggtggcgggcagtaagtcggtcgttgtggcgcgctgcgagtccgtggacggccgcccc
cctgccaagatctcctgggtgaccgcagccaatggcaacggcacaacggttaccaaaccg
ggcgccgacaacacggtgacggtgatcagcgagtacagcatggtcccctcccccaaagac
aacgggaaggacctgagctgcgtggtggctcacaggacgcaggtcaaaccagagagcttc
cacctgaagctggcagtggaatttgcccctcaggtgacaatagtaggttacgacaataat
tggtacgtgggtcgtacaaatgtggagctcacctgccaggccacgggaaaccccacgccg
ctgaccgcccagtggaagacgatgacgggagagatgcccgacacggtgcagatcacagac
aacaagctgaaggtgctgaaggtggacgacgccgtcaacaccacttttgtctgcgaggtc
aagaaccgcatcgggctgggcagggatcaggtcgccgtcatggtcagagagccctcagtg
aacccatccaatgccggcgtggtggcgggagctgtgattggctccctgctggctctcctt
ttggtcgccgctctcatcgccgtgctcatcacccgtagccgccggcaacagcagggttac
cgcgccaacggcggcaccgacatgaagacgcgcatgttcggcggaggcaagaaggccagc
aagaacggcacgggcggaggcaacgggagcggagtaggagttggaggcgggaacaacaat
gggccgatctacgtctacgatcagggctcctcccatccgggcctcggagagaaaaacaac
caccaccagccactcaccatggggggcgtcgccacgacacccaccgcccaagatatcctg
ttgagcaacgagctagatgacggcgagaggaggaagtttgacgagctggaggaggacgag
agatatgataatttcaccggaggcgcccccatccttcagctccgcccgccacacgaccag
gacgatataattggagactacatggatgacgacatggagtcccagcgagatggatccgtc
atctcacggactgctgtctacgtatag
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