Trematomus bernacchii (emerald rockcod): 117478919
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Entry
117478919 CDS
T09643
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00280
Valine, leucine and isoleucine degradation
tben00650
Butanoate metabolism
tben00900
Terpenoid backbone biosynthesis
tben01100
Metabolic pathways
tben03320
PPAR signaling pathway
Module
tben_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
117478919 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
117478919 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
117478919 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
117478919 (hmgcs1)
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
117478919 (hmgcs1)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
Lectin_C_term
PS_Dcarbxylase
Motif
Other DBs
NCBI-GeneID:
117478919
NCBI-ProteinID:
XP_033981769
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All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MSRVLLSRFTTSLTSLKRSSGRPLPLEPVLCSLYKMSFGRQLSGMQRMPGSAPISGLGPW
PKDVGIIALELYLPSQYVDQTELEQEDGVAPGKYTVGLGQDRMGFCSDLEDINSLCLTAV
QKLMERNGLSYDSVGRLEVGTETIIDKSKSVKTVLMQLFEDSGNTDVEGIDTTNACYGGT
AALFNAVNWVESSSWDGRYAVVVAGDIAVYASGSARPTGGAGAVAMLVGPNAPLAFEQGL
RGTHMQHAYDFYKPDLMSEYPVVDGKLSIECYLSALDRCYAVYRNKIHAQWQKEGSEERF
SLEDFGYLVFHSPYCKLVQKSLARLMLNDFLLHPNPNTETGPFTGLDAFRDVKPEETYFD
RDVEKAFLKASTDMFEKKTKHSLLVSNQNGNMYTPSVYGCLASLIATHSASQIAGQRVGV
FSYGSGFAATLYSIRVTQDHTPGSALDKLVSSLSDLKLRLDSRQKVSPPVFSECMKLRQE
THHLAPYVPSSSVEDLFPGTWYLTRVDEKHRREYARSAPGIELSAESEGVRSTTATEQHI
PSPAKKMPRIPATPGAPISN
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtccagggtcctcttgtcacgcttcacgacatccttgacatccttgaagcgcagcagt
ggtcgtcctctgcctctggaaccagtgctctgctcgctgtataagatgtcctttggcagg
cagctatctggcatgcaaaggatgccaggatcagccccgatcagtggcctgggaccatgg
cccaaagatgtgggcatcattgccttggagctgtacttgccgtcgcagtacgtggaccag
acggagctggagcaggaggacggggtggcacccggtaaatacaccgtggggctcggccag
gaccgcatgggcttctgctcggaccttgaggacatcaactctctgtgcctcaccgcggtc
cagaagctgatggaaagaaacggcctctcctacgacagcgtgggtcgcctagaggtcggc
accgagaccatcatcgacaagtccaagtcggtgaagacggtcctcatgcagctgtttgag
gactctggtaatacagatgtggagggcatcgacaccaccaacgcctgctacgggggcaca
gctgctctcttcaatgctgtcaactgggtggagtccagctcctgggatggccgttatgct
gtggttgtagcgggggacattgctgtttacgcctcaggaagcgcgcggcccacaggaggg
gccggggccgtggccatgctggtggggcccaacgctcctctggcttttgaacaaggtctg
agaggaacccacatgcagcacgcctacgacttctacaagcccgacctgatgtcagagtat
cccgtggtggacggaaagctgtccatcgagtgctacctgagcgccttggaccgctgctac
gctgtgtaccgcaacaagatccacgctcagtggcagaaagagggctcagaggagcgcttc
agcctggaggacttcggctacctggtcttccactctccgtactgcaagctggtgcagaag
tctctggccaggctgatgctcaacgacttcctgctccaccccaaccccaacactgagacg
ggacccttcaccggcctcgacgccttcagagacgtgaagccagaggagacgtacttcgac
cgggacgtggagaaggctttcttgaaggccagcacagatatgtttgagaagaagaccaag
cactccctgctcgtctccaaccagaacggaaacatgtacacgccctcggtctacggctgc
ctggcatcgctcatcgcaacacacagcgcctctcagatagccggacagagagtcggagtt
ttctcgtacggctcagggttcgctgccactctgtattccatcagagtgacacaggaccac
acgccaggatctgctctggacaaactggtgtccagcctgagcgacctgaagctgcgtctg
gactccagacagaaggtttctcctcccgtcttctccgagtgcatgaagctgagacaggag
acgcatcacttagccccctacgtccccagcagctctgtggaggatctgttccccgggacg
tggtacctgacccgagtggatgagaagcaccgcagggagtacgcccgcagcgcccccggc
atagagctgtctgcagagtcagagggggtccgctccaccaccgccacagagcagcacatc
cccagtccagccaagaagatgcctcgtatcccagcaacccccggggctcccatcagcaac
tga
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