Trematomus bernacchii (emerald rockcod): 117479356 Help Entry 117479356         CDS       T09643                                  Symbol plxnd1 Name (RefSeq) LOW QUALITY PROTEIN: plexin-D1   KO K06822   plexin D Organism tben  Trematomus bernacchii (emerald rockcod) Brite KEGG Orthology (KO) [BR:tben00001]  09190 Not Included in Pathway or Brite   09193 Unclassified: signaling and cellular processes    99995 Signaling proteins     117479356 (plxnd1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Plexin_cytopl Plexin_RBD TIG Sema PSI TIG_plexin PSI_PlexinA-B Motif Other DBs NCBI-GeneID:  117479356 NCBI-ProteinID:  XP_033982176 LinkDB All DBs Position Unknown AA seq 1897 aa AA seqDB search MPPSIEIAVLLLGVLALETHRSASALHIQQAFASPNQTNNFAVDPVSRKVYLATVNTVYQ LNGTLSIEVEQRTGPVEDNLLCHAPQLPQAPCEHPKSLTDNHNKLLKLDRDQGVVLVCGS VYQGFCELRNIENISEIAVEFPHQGEKTVFPSMLNIAANHPNASTVGLIFKSHGGKTRLL VGATYTGAGTQFFPKNHSKEDLRFENTPEIAIRSLNIKDLSRLFTYDINPSEDNVFKIKQ DVKTKNKLNFVHAFMQKTYSYIAFNNDAKMGHKESLPNSILARICLDTENPRKPSGPESR KLTESYIQMPLQCGFNGNIYNRLLSVYPAEIPTEDGKSSEPYLFGVFSKADRKSALCAFK FGDIDEEIRQGRRNCSNSPSSDVQVLDSVIQGSGAACIQKGNLVLQPDQLDCGAAHLQHP LALRRSLRAIPLVEYTGLTSVSVDNVHNHTVVFMGTSNGRLRKLTLLANMTLRNQWMLKL PASEAVHHIMTFDPNDRNFLYLMTSHHMLRVRVADCDQWTSCGECLGAGDAHCGWCTLEN RCTIQKECAQGLLARSWISMGEGPQQCPSMTLTPPEISIAADIKDVGILINGSVPDLVNS RVECEYGPGVSTAATVHLDYGPAQIQTCPLLPRENYQPILPGTDHLTVSVAIKVNGTSVV SGSFIIYDCKRTGAIHPKTSCVSCLSTRWKCYWDPENHLCVSNKDESKHSLLENAASCPS LVASEVPPSPSEMAQDFTLSLSNIQENEELECDFGTGQRYEATWLNSSTVKCSGVTLSTN HRSQVYHLNLRRKGYFSGNGDDVFVDSPQPMRVEVYNCGVGSSDCSQCWGREDQGHLCGW CDNSCRPRDDCQPIRDQCPPPEIHKISPLRGPVEGGTLLTVQGRNLGRRAAAVKVSIGDV QCTLLPEFYTVSVEMVCVTGKSSRERTDIVEVDVEQSGIGPSKESFSYLIPKLQSLEPTK GSRAGGTIVIISGENLDIGSQVRVKVNNTLECTITDKTDETIECTMPPALQADTESVAVC VEFENLPCQSAELSTSYTYQKNPTISFIHPKKSYLSGGRTITVTGHGFDLVQSVTMEVME IGEKRCAVVSPFTITCPSPASSQSQQTTAQFILNGVLYTGNNPFTFDNDEDDGEPHKGHF PLEYVEDPQFFTASKEKLIKHHPGEPLTLIINKGPSDLELMPEEYSVMIGPYPCNISFHN DQLFHCTINGLLSSNENELPVTVQVGNFRHTIAIVQLGGSELAIVVSIVVCCVLLLLCTV ALVVYCTKSRRAERYWQKTLLQMEEMESQIRDEIRKGFAELQTDMTDLTKELNRSQGIPF LEYKQFVTRTFFPKMFSDYEKSLVQPAFEYDGLGPRVLPETHPLLQDWQENNTTKPNVEE GITLFSTLLNNKHFLVTFVHALEQQKDFAVRDRCSLASLLTIALHGKLEYYTSIMKDLLV DLIDASAAKNPKLMLRRTESVVEKMLTNWMSICMYSYLKETVGEPFFLLLCAIKQQINKG SIDAITGKARYTLNEEWLLRENIEAKPQNINVSFQGCGMDSISIKVMNTDTISQVKEKIL EAFYKNLPFSQWPRAEDVDLEWFDSGSNSKVLQDLDNSTLMEDGRKKLNTVFHYQIPEGA SLAMSMKDKRDNTLGRVKDLDTEKYVHLVLPHDDQNDHKRSHRTSHRKKVLPEIYLTRLL STKGTLQKFLDDLFQAILSIPQDRPPLAIKYFFDFLEEQADKRGITDPDTLHIWKTNSLP LRFWVNILKNPQFVFDIDKTDHMDACLSVIAQAFIDACSISDLQLGKDSPTNKLLYAKEI PEYKKRVQCYYKQIQDMPPLSEQEMNAHLAEESRKYRNEFNTTLALTEIYKYAKKYRTQV VTALESNPTALRTQLHHKFEQVIALVEDNIYECCSEA NT seq 5694 nt NT seq  +upstreamnt  +downstreamnt atgcctccttcgatagagatagctgttctgctcctcggcgtcctggctttggagacgcac cggagtgccagcgcgctgcacatccaacaggcgttcgcgtctccaaatcagaccaataac ttcgcggtggacccggtgtccagaaaggtgtacctggctaccgtcaacacagtctaccag ctgaacgggaccttgagcatcgaggtggagcagaggaccggaccggtggaggacaacctg ttgtgccatgcgccacagctgccccaggctccgtgcgagcatcccaaatccctcactgac aaccacaacaagctcctgaagctggaccgggatcaaggggtcgtgctggtgtgtgggtcc gtctatcaaggcttttgtgagctcagaaatatcgagaatatttcggagatagcggtggag ttcccacatcagggcgagaagactgttttccctagcatgctgaacattgctgccaatcac ccaaacgcatccacggtgggtctgatctttaagagccacggggggaaaacccggcttctc gtcggggccacttacactggggctggtacccagtttttcccaaagaaccacagcaaggag gacctgcgctttgagaacacaccggagatcgccatccgctccctgaatatcaaggatcta tcccggcttttcacctatgacattaacccttcagaggataatgtattcaagatcaagcaa gatgttaaaactaaaaacaagctgaacttcgtacacgctttcatgcagaagacttattcc tacattgcctttaataatgacgcgaaaatgggccacaaggagagcctgcccaacagcatc ctcgccaggatatgtctggacaccgagaacccccgaaaacccagcgggccggagagcagg aagctcactgaatcctacatccagatgccgctccagtgtggatttaacgggaacatttac aaccggctgctgtccgtttaccccgcggagatccccacagaagacgggaagagttccgag ccctacctgtttggagtgttttccaaggcggacagaaagtctgctctgtgcgctttcaag tttggagacatcgatgaggagatccgacaaggccgcaggaactgctccaactctcccagc agcgatgtccaggtgctggacagcgttatccagggctccggggcagcctgcatccagaag ggaaacctggtgttgcagcccgatcagttggactgcggggcggcccacctccagcacccc ctggccctgcggaggtccctgagggccattcctctggttgaatacacgggcctaacttca gtctctgtggacaatgtgcacaaccatactgtggttttcatgggaaccagtaacggacga cttcgtaagctgaccctcttggcgaacatgaccttgagaaatcaatggatgctgaagttg ccagcaagtgaagcagtccaccacatcatgactttcgaccccaacgacaggaacttcctt tatctcatgacttctcaccatatgctcagggtgagagtggccgactgtgaccagtggacg agctgcggtgagtgtttgggagccggcgacgcccactgtggctggtgcactctggagaat cgatgtaccatccagaaggagtgcgctcaggggctgttggcccgctcctggatcagcatg ggtgaaggcccgcagcagtgtccgtccatgaccctgacacccccggagatcagcatcgct gcagacatcaaggatgtcggcattctgataaatggcagtgttcctgatctggtgaactcc cgggtggagtgtgaatatgggccgggtgtttctacagctgccacggtgcacctggattac ggtcccgctcagatccagacctgtcccctgctgcctcgagaaaactaccaaccaatcctc cccggcacagatcatctgactgtttctgtggcgataaaagtgaatggcacatctgtggta tctgggagcttcatcatctacgactgcaagaggaccggagccatacaccccaagacatcg tgtgtgagctgcctgagcaccaggtggaagtgctattgggaccccgagaaccacctatgc gtctccaataaagatgagtcaaagcacagcctgctggagaatgcggcttcctgtccaagc ctggtggcctcagaggttcctccatcaccttcagaaatggcccaggacttcactttatcc ctcagcaacatccaggagaatgaagagctggagtgcgactttgggacagggcagcggtac gaggccacctggctgaacagctccacggtgaagtgcagtggagtaacactgtccactaat cacaggagccaggtttaccacctcaacctgaggaggaaaggatacttcagtggaaatggg gacgatgtctttgttgacagccctcagcccatgagagtggaagtgtacaactgtggagta gggagctccgactgctcccagtgctggggccgggaggaccagggccacctctgcggctgg tgtgataacagctgcaggccgagggatgactgccagccaatcagagatcaatgtccgcct cctgagatccacaagatctcccccctgaggggtccagtggagggaggcaccctgctgaca gtacagggcaggaacctgggccggagggcggcagcagtaaaggtctctattggagatgtg cagtgtactctcctgcctgagttctacaccgtctctgtggagatggtgtgtgtcactgga aagtcttcacgtgagaggacagatattgttgaagtggatgtggaacaaagtgggattgga ccgtcaaaggagagcttctcgtacttaatcccaaaactgcagtccttggagccaacgaag ggctcccgagcgggaggaactatagtcatcatcagcggggaaaacctggacattggctct caggtcagagtcaaggtcaacaacacactggagtgtaccatcacagacaaaacagatgaa accattgagtgcaccatgcctccggccttacaggcagacactgagtcagtggcagtgtgt gtggagtttgaaaaccttccctgccaaagtgcagagctgagcacctcctacacctaccag aagaaccccaccatcagcttcatccaccccaaaaagagctacctcagtggaggcaggacc atcacagtgacgggtcacggttttgatctggtgcagagtgtcaccatggaggtgatggaa attggagaaaaacgctgcgcagtggtctctcccttcacaatcacctgcccctccccggca tccagccagtcccagcagaccactgcacagtttatcttgaacggagtcctctacacgggc aacaaccccttcacctttgataacgatgaagatgatggggagcctcataaaggtcacttc ccattggagtacgtggaagacccccagttcttcactgccagcaaggagaagctgattaaa caccacccaggagagccactgacactcatcatcaacaaaggaccgagcgatctggagcta atgccggaggaatactcagtgatgattggcccgtatccctgtaacatcagcttccacaac gaccagctgttccactgcaccatcaatgggctgctaagctccaacgagaacgagctccct gtcactgtgcaagtggggaactttcgtcacaccatcgccatagtgcagctcggaggcagc gagctggccatcgtggtgtccattgtggtgtgctgcgtgctgctgctgctgtgcactgtg gcccttgtagtgtactgcacaaagagccggagggcagagcgctactggcagaaaacacta ctgcaaatggaggagatggagtcacagatcagagatgagatccgtaaaggctttgcagag ctccagacggacatgacagacctgaccaaggagttgaatcgcagccagggcatccccttc ctggagtacaaacagtttgtcacacgcacgtttttccccaagatgttttcggattacgag aagagtctggtccagcctgccttcgagtatgatggcctgggccctcgagtgctgccggag acccacccgctgctgcaggactggcaggagaacaacacaaccaagcctaacgtagaggag ggcatcactctgttctccactcttctcaataacaaacacttcctggtcacgtttgtccac gccctggagcagcagaaggacttcgctgtacgagacagatgcagcctggcgtctctgctc accatcgctcttcatggaaagctggagtactacaccagtatcatgaaggatctgctggtg gacctgattgatgcttcggctgccaagaaccccaaactgatgctgcgccgcactgagtcc gttgtggagaaaatgttgaccaactggatgtctatctgcatgtacagctacctcaaggaa acggtgggcgagcctttcttcctgctgctctgtgcaatcaagcagcagatcaacaagggc tccatagacgccatcacagggaaggcccgctacaccctcaatgaggagtggctgctgcgt gagaacattgaggccaagccacagaacatcaatgtctccttccaaggctgtggcatggac tcaatatcaatcaaggtcatgaatacagacacaatcagccaggtgaaggaaaaaatctta gaagccttttacaaaaacctgccattctcccagtggccccgagcagaggatgtagacctg gaatggtttgactctggcagcaacagtaaggtcctgcaggacctggataactccacattg atggaagacggccggaagaagctcaacacggtcttccattaccagatccccgagggggca tcgctggccatgagcatgaaagacaagagagataacacccttgggagagttaaagatctg gataccgagaagtatgtacacttggtcctacctcatgatgatcaaaatgaccacaagagg tcacacaggacgagccaccgaaaaaaggtccttcctgaaatctacctgacgcgcctgctg tctactaagggaactcttcagaagttcctggatgacctctttcaagccatcctcagcatc cctcaggaccgcccccctctggctatcaaatacttctttgacttcctggaggagcaggct gacaagcggggcatcacagacccagacacgctgcacatctggaaaaccaacagtttacct ctgcggttctgggtgaacatcctgaagaatcctcagtttgtgtttgacatcgataagacg gaccacatggacgcctgtctgtctgttatcgcccaggccttcatagatgcctgctccatt tctgacctgcagctcggaaaggactcccctaccaacaagctgctgtatgccaaggagatc ccagagtataagaagagagtgcagtgctactacaagcagatacaggacatgccacctctt agcgagcaggagatgaatgctcacctggctgaggagtcacgaaaatacagaaatgaattc aacaccaccctggccttgacagaaatctacaaatatgccaagaaatacagaacgcaggtg gtgaccgctctggagtcgaaccctactgcacttcgcactcaactgcaccacaagttcgag caggtcattgcccttgtggaggacaacatctacgagtgctgcagcgaagcctga

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