KEGG   Trematomus bernacchii (emerald rockcod): 117480268
Entry
117480268         CDS       T09643                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04145  Phagosome
tben04514  Cell adhesion molecules
tben04672  Intestinal immune network for IgA production
tben05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tben00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    117480268
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117480268
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    117480268
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117480268
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tben04147]
    117480268
Exosome [BR:tben04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117480268
  Exosomal proteins of epithelial cells
   117480268
  Exosomal proteins of breast milk
   117480268
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 C2-set_2 Ig_2 ig I-set
Other DBs
NCBI-GeneID: 117480268
NCBI-ProteinID: XP_033983428
LinkDB
Position
Unknown
AA seq 294 aa
MNIRNTYTVNSENHNLTNSKNLLPAKQSSISLFCTQSLHLRVAMMKICSQDMKRSALILL
MINSFCAFSQIPHDTIYVVGCFENGTSEVHFELDSEEMVYMDFDKSDIVYTVPRIFVDDP
SKMFDHMNVFTNANKGKKMCAALLQYFKIEVKNPPEEKDPPESVLYPAEEVEFGRENSLI
CFVNNFYPPEVRVMWTRNGVQVSEGVSLSRYFPNKDQTFHQFSTLTFTPREGDIYSCTVE
HSALDMPQTTIWGDEPVISHRSLGADVYCGVGLTLGLLGVAAGTFLMVKGHHGH
NT seq 885 nt   +upstreamnt  +downstreamnt
atgaacatcaggaatacttatacagtaaatagtgagaatcacaacctgacaaattccaag
aacctcctccctgccaaacagtcttccatttctttattttgcacacaatctcttcatctg
agagtcgcaatgatgaagatctgcagccaagacatgaagcgctcagctctcatactcctg
atgatcaacagcttctgtgccttttcacaaattcctcatgacactatctatgttgttggc
tgctttgaaaacgggacatctgaagtacattttgaattagattctgaggagatggtgtac
atggattttgacaaatctgatatagtttacactgtgcccagaatttttgtggatgatcca
agcaaaatgtttgatcatatgaatgtattcactaatgctaataaaggcaagaagatgtgt
gcagcattgcttcaatacttcaaaattgaggttaaaaatcccccagaagaaaaagacccc
cctgagagcgtcctctaccctgcagaagaagttgagtttggacgtgaaaacagcctcatc
tgctttgtgaataatttctacccacctgaggtcagagtcatgtggaccaggaatggtgtt
caggtgtcagagggggtgtcactcagccgatatttccccaataaagatcaaaccttccac
cagttttctaccctgacgttcacaccgagggagggggacatttacagctgcactgtggag
cactcagccctggacatgcctcaaacaacaatctggggtgatgaacctgtcatcagtcat
cgcagtctgggagcagatgtttactgtggagtgggcctgactctgggcttgttgggagtc
gcagccggaacatttttaatggttaagggacaccatggacactaa

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