KEGG   Trematomus bernacchii (emerald rockcod): 117480269
Entry
117480269         CDS       T09643                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like
  KO
K06752  MHC class II antigen
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04145  Phagosome
tben04514  Cell adhesion molecules
tben04672  Intestinal immune network for IgA production
tben05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tben00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    117480269
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117480269
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    117480269
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117480269
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tben04147]
    117480269
Exosome [BR:tben04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117480269
  Exosomal proteins of epithelial cells
   117480269
  Exosomal proteins of breast milk
   117480269
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 ig C2-set_3
Other DBs
NCBI-GeneID: 117480269
NCBI-ProteinID: XP_033983430
LinkDB
Position
Unknown
AA seq 252 aa
MGMKCSFSLLFLILFFSRADALFGHGLLHCQFTSPDDVVYLEQIFFNKVLQIQYNSTLGK
YTGYTEKTKEIAEGLNKNPKFIKEEKKNELKCKNHIALFFDVFLKPDLHLEPSVRVRSVE
AASSRHPGMLVCSVHYFFPKPIRVTWLRNGKEVTSDVTSTEKLSNGDWHYQIHSYLEFTP
VPGEKITCMVEHAHFMKPKLCEWDPRTDRESENNKIAVGTAGLLLGLVFFVAGLIYYKKK
TYGRELVPTNSI
NT seq 759 nt   +upstreamnt  +downstreamnt
atgggtatgaagtgctcgttttcactgctgtttctgatcctttttttttcaagagctgat
gctctttttggtcatggtttgctccactgccagtttacttcacctgatgacgttgtttat
ttggaacaaatcttcttcaataaagtgctacaaatccaatacaacagcactttggggaag
tataccggctacacagagaaaacaaaagagattgcagaaggcctcaacaaaaatccaaaa
tttataaaagaagaaaaaaaaaatgaactgaaatgcaagaaccacatcgcattgtttttt
gatgtatttttaaaaccagacctccatttggagccctctgtcagggtaaggtcagtggaa
gcagcgagcagccgacacccaggcatgctcgtctgcagtgtgcactacttctttcccaaa
ccaatccgagtgacttggctgaggaacggaaaggaggtgacatctgatgtgacgtccact
gagaaactgtccaatggggattggcattatcagatccactcctacctggagttcacacct
gtacctggagagaaaatcacctgcatggtggagcacgcccacttcatgaagcccaagctt
tgcgagtgggatccgagaactgaccgagagtcagagaacaacaagattgctgtcgggaca
gcggggctgctgctgggtctggtgttttttgttgctgggctgatttactacaagaagaaa
acttatggacgagagttggtgccaactaattctatttaa

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