KEGG   Trematomus bernacchii (emerald rockcod): 117480270
Entry
117480270         CDS       T09643                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like
  KO
K06752  MHC class II antigen
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04145  Phagosome
tben04514  Cell adhesion molecule (CAM) interaction
tben04672  Intestinal immune network for IgA production
tben05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tben00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    117480270
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117480270
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    117480270
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117480270
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tben04147]
    117480270
Exosome [BR:tben04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117480270
  Exosomal proteins of epithelial cells
   117480270
  Exosomal proteins of breast milk
   117480270
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 C2-set_2 Ig_2 ig I-set
Other DBs
NCBI-GeneID: 117480270
NCBI-ProteinID: XP_033983431
LinkDB
Position
Unknown
AA seq 249 aa
MMKTCSQDVKRSALILLMINSFCAFSQIPHETIYVVGCFENGTSEVHFELDSEEMLYIDF
DKSDIVYTVPRIFMDDPSKMFDHMNVFTNANKNKKLCVALLQYLKIEDKNPPEEKDPPES
VLYPAEEVEFGRENSLICFVNNFYPPEVRVMWTRNGVQVSEGVSLSRYFPNKDQTFHQFS
TLTFTPREGDIYSCTVEHSALDMPQTTIWEPDISHRSLGADVYCGVGLTLGMLGVAAGTF
LMVKGHHGH
NT seq 750 nt   +upstreamnt  +downstreamnt
atgatgaagacctgcagccaagacgtgaagcgctcagctctcatactcctgatgatcaac
agcttctgtgccttttcacaaattcctcatgagactatctatgttgttggctgctttgaa
aacgggacatctgaagtacattttgaattagattctgaggagatgttgtacatagatttt
gacaaatctgatatagtttacactgtgcccagaatttttatggatgatccaagcaaaatg
tttgatcatatgaatgtattcactaatgctaataaaaacaagaagctgtgtgtagcattg
cttcaatacttaaaaattgaggataaaaatcccccagaagaaaaagacccccctgagagc
gtcctctaccctgcagaagaagttgagtttggacgtgaaaacagcctcatctgctttgtg
aataatttctacccacctgaggtcagagtcatgtggaccaggaatggtgttcaggtgtca
gagggggtgtcactcagccgatatttccccaataaagatcaaaccttccaccagttttct
accctgacgttcacaccgagggagggggacatttacagctgcactgtggagcactcagcc
ctggacatgcctcaaacaacgatctgggaacctgacatcagtcatcgcagtctgggagca
gatgtttactgtggagtgggcctgactctgggcatgttgggggtcgcagccggaacattt
ttaatggttaagggacaccatggacactaa

DBGET integrated database retrieval system