Trematomus bernacchii (emerald rockcod): 117480844
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Entry
117480844 CDS
T09643
Symbol
plod3
Name
(RefSeq) LOW QUALITY PROTEIN: multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3
KO
K13646
lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:
1.14.11.4
2.4.1.50
2.4.1.66
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00310
Lysine degradation
tben00514
Other types of O-glycan biosynthesis
tben01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117480844 (plod3)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
117480844 (plod3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tben01003
]
117480844 (plod3)
Enzymes [BR:
tben01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.4 procollagen-lysine 5-dioxygenase
117480844 (plod3)
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
117480844 (plod3)
2.4.1.66 procollagen glucosyltransferase
117480844 (plod3)
Glycosyltransferases [BR:
tben01003
]
O-Glycan biosynthesis
O-linked Gal type
117480844 (plod3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
2OG-FeII_Oxy
2OG-FeII_Oxy_3
Motif
Other DBs
NCBI-GeneID:
117480844
NCBI-ProteinID:
XP_033984218
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
MSACRLLCLLALSFLQSSVWAGPLSPENLMVITAATEETDGFNRFMRTAREFNYTVKVLG
LGEEWEGGDVARTVGGGQKVRWLKRELLKLSERKELIVMFVDSYDVIFSAGPEELLSKFS
RLSHRVVFSAEGFCWPDQRLANKYPEVHSGKRYLNSGGFMGFASDLSLMVQQWKYKDNDD
DQLFYTKIYLDRVQRTKFNMTLDHRSRIFQNLNGAVDEVVLKFEKAKVRARNVAYDTLPV
IIHGNGPTKLQLNYLGNYVPTAWTFESGCGLCDEDLLIHNDTPDEEMPLVYIGVFIEHPT
PFMEEFLERLTTMNYPLERVRLFIHNSVVYHERHIKRFWEKHRSLFPEARLIGPEENLPE
NKARHMAVEACKKDLGCDYYFSIDSDVALINADALRILIEENKSVIAPMLSRHGKLWSNF
WGALSPEGFYSRSEDYIEIVQGKRIGLWNVPYITQAYLLRGSVLRSRLSQASLYLDETMD
PDMVFCRSIRDQGVFMFVSNRDEFGRLTASANFNTSKLHPDMWQIFDNPVDWKEKYISED
YPKIFENNSIVTQPCPDVYWFPAFSEKMCDHLVETMEALDDWSGGKHTDERLAGGYENVP
TVDTHMTQIGFEKEWLKFLKEYISPITEKLYPGYYPKSQAIMNFVVRYRPDEQPSLRPHH
DSSTFTINIALNSKGEDYEGGGCRFLRYDCKVESPRKGWSFMHPGRLTHYHEGLPTTRGT
RYIMVSFVDP
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctgtcgtctcctctgcctgctggctctctctttcctccagagctccgtgtgg
gccggccctctctctccagagaacctgatggtgatcacggcggccaccgaggaaacagac
ggcttcaacagattcatgaggacggctcgagagttcaactacaccgtgaaggtgctgggt
ctgggggaggagtgggaagggggggacgtggcccgcaccgtggggggtgggcagaaggtc
cgctggctgaagagagaactcctgaaactctcagagagaaaagagctcatcgtcatgttc
gtggacagctatgatgtgatcttctcagcgggtccggaggagttgctctctaagttttca
cgcctctctcaccgcgtggtgttttctgcggagggtttctgttggccggaccagagactc
gccaacaaataccctgaggtgcattctgggaaacgctacctgaactccggagggttcatg
ggctttgcctctgacctcagcctgatggtgcagcagtggaaatacaaagacaacgacgac
gaccaactcttctacaccaagatctacctggacagagtccagaggacaaagttcaacatg
actctggaccatcgatccagaatcttccagaacctgaacggagctgttgacgaggtcgtc
ctgaagtttgagaaggcgaaggtcagagcgaggaacgttgcctacgacacacttcctgtc
atcatccacggaaacgggcccaccaagctccagctgaactacctggggaactacgtgccg
acggcctggacgtttgagagcggctgcgggctctgtgacgaggaccttctgatccacaac
gacacgcctgacgaggagatgcctctggtttacatcggagtcttcatcgaacatccaact
cccttcatggaggagtttctggagagactgaccaccatgaactatcctctggagagggtc
cgcctgttcatacacaacagcgtggtgtatcacgaacgtcacatcaagcgtttctgggag
aaacaccgctctcttttccccgaggcccgtctgatcggaccggaggagaaccttccggag
aacaaggctcggcacatggctgtggaggcgtgtaagaaggacctcggctgtgattactac
ttcagcatcgactctgacgtggctctgatcaacgccgacgccctgcggatcctcatcgag
gagaacaagtcggtgatcgcccccatgctctctcgtcacggtaaactctggagtaacttc
tggggcgctctgagtccggagggcttctactccagatctgaggactacatcgagatcgtg
cagggcaagaggattggtctctggaacgtcccctacatcactcaggcctacctgctccga
ggctccgtgctgcgctcccgtctctctcaggcgagcctctacctggacgagaccatggac
cctgacatggtgttctgcaggagcatcagagaccagggcgtcttcatgttcgtttcaaac
cgcgatgagttcgggcgtctcactgcctcggcgaacttcaacacctccaagctgcacccc
gacatgtggcagatcttcgacaaccccgtggactggaaggagaagtacatcagtgaggat
taccccaagatctttgaaaacaactccatcgtgacgcagccctgtccagatgtgtactgg
ttcccagcgttctcagagaagatgtgtgaccacctggtggaaaccatggaggccctagac
gattggtcgggggggaaacacacggacgagcgtctggcgggggggtacgagaacgttccc
acggtggacacgcacatgactcagatcggcttcgagaaggagtggctcaagttcctgaag
gagtacatcagccccatcactgagaagctgtaccccgggtactaccccaagtctcaggcc
atcatgaacttcgtggtgcgttaccgtccggacgaacagccgtctctgcgaccgcatcac
gactcctcaacgttcaccatcaacatcgctctgaacagcaagggggaggactacgagggc
ggcggctgcaggttcctgcgctacgactgcaaagtggagtctcctcgtaaaggctggtcc
ttcatgcaccccggacgcctcacacactaccacgagggcctgcccaccaccaggggcacg
cgctacatcatggtgtccttcgtggacccctga
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